Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1191 ATGAAAATGTGTGGAATAATTGTAAATTGTATAGCTCATAATGTTGTCAAGTTTTTTCTTCTTTTTACGTGGCGCATAGCATCCTATTGCTCATTGAACCCTTCTCTGCTTCTTCCATACTTCACTCCCTCTTCAATCCACATGTCGACTTCCGGTCAGGATCAAGCCGCTCGCCATCACCTCTCTCAATTCCAATTCCATCTTCTCCACTCCCATTCTCAAGTTCAGTACGATCGCACTTTCACTTCTCAGCCTTTCTCCTCCTCTTCTTCCCACCAATTCGCTTCTGAAGATGCCCACTCTGCTTTTGCAAAGCTTGCCACTGTGACTTCCACTTCTACTATATTTATGATGAAGTCAACTTTCGGTATCAGATGGTGTTCGAATGTCAATAATAAATATGGAGAAAGATTGAGTCAAAGATATGAAATTGATAATTCCGGGCCTCAGATGAGTAATCCTGAAGTAACTCCAAATCTGAGCAAAATGGTTAATGTTTCTCCACTTAAAACTGAGCCTTTCGTAAGTGGAAAACACCATGGTAAATCAAAAGTTTCAAGAAATGCAAAATCAGGGAATCAGAGATCAAATTCTGAGTCTTCTAATCCAACTCCAGTTAATTGCCGTTATGATAGTTCCTTGGGACTGTTAACCAAGAAATTTGTCAGTTTAATTCAGGAGGCTAAGGACGGTACCTTAGATTTAAATAAAACGGCCGAGATATTGGAGGTTCAGAAAAGGAGAATTTATGATATTACAAATGTTCTTGAAGGAATAGGATTGATAGAAAAAACATCGAAGAACCATATACGGTGGAAGGGATATGATGGACTGGGGCCAGGCGAACTGGATGATCAAGTTACTAGATTAAAGTCTGAAGTTGAAAATCTATATTCTGAGGAATGCCAACTTGATGATATTATAAGGAAAAAGCAAGAGCTCCTAAGAACTTTGGAGGAAAAAGAAAACCATCAAAAGTACCTTTTTTTGACTGAGGAAGATATTCTTAGCCTTCCATGCTTCCAGGATCAAACACTCATTGCCATCAAGGCTCCCCAAGCTAGTTTCGTTGAAATTCCTGATCCTGATGAGGATAATGATTTCCGGCAAAGGCAGTATAAAATGATCGTTAGGAGCACCACTGGACCAATAGATTTGTACCTCTTGAGCAAACACAACTCCAATTATGAGGACGTTAGCTTCAACCAGGCTACGTTAATAGATCCTTCACAGAAAGGTGACCAGTGTGGATTGAAGAGTGCAGGATTACGTTTAGAAAGCCAAGATGCCCAGAAAAGCCCTTCTCAAAGTTTTAGCTCGCTGGAGTCGGAGCCACCTGGCATTCAGAAAATTACACCAATGGATTTTGATATCGAAGATGACTACTGGTTCCAATCAGATCATGGAGTCACCCTAACGGATTTGTGGGCGAATGAGGAATTAGTTCACATAGATGAGGTCCTTCAAGACGATTACTCGAATTTGGGTGGTGCATTCACTCAAACACCAGCTTCCCCGACAGATGTGGTCAATAGGATTGTGGAGCTTCGGTGGCAATTCGGAAATGCACCTTTCAACAACCTGCAGATAATTATGGATTCGCTGTTTGGTTTCTGCCCAATGAGGCTTGAGACATTATTTGATTGTATGATCCGGGAAGTTGAGACCCGAGATTTGATGGGGTGA 1686 0.4104 MKMCGIIVNCIAHNVVKFFLLFTWRIASYCSLNPSLLLPYFTPSSIHMSTSGQDQAARHHLSQFQFHLLHSHSQVQYDRTFTSQPFSSSSSHQFASEDAHSAFAKLATVTSTSTIFMMKSTFGIRWCSNVNNKYGERLSQRYEIDNSGPQMSNPEVTPNLSKMVNVSPLKTEPFVSGKHHGKSKVSRNAKSGNQRSNSESSNPTPVNCRYDSSLGLLTKKFVSLIQEAKDGTLDLNKTAEILEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKGYDGLGPGELDDQVTRLKSEVENLYSEECQLDDIIRKKQELLRTLEEKENHQKYLFLTEEDILSLPCFQDQTLIAIKAPQASFVEIPDPDEDNDFRQRQYKMIVRSTTGPIDLYLLSKHNSNYEDVSFNQATLIDPSQKGDQCGLKSAGLRLESQDAQKSPSQSFSSLESEPPGIQKITPMDFDIEDDYWFQSDHGVTLTDLWANEELVHIDEVLQDDYSNLGGAFTQTPASPTDVVNRIVELRWQFGNAPFNNLQIIMDSLFGFCPMRLETLFDCMIREVETRDLMG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1191 561 MobiDBLite consensus disorder prediction 187 207 - -
Lele01g1191 561 Coils Coil 304 324 - -
Lele01g1191 561 MobiDBLite consensus disorder prediction 425 448 - -
Lele01g1191 561 SUPERFAMILY "Winged helix" DNA-binding domain 209 272 IPR036390 -
Lele01g1191 561 FunFam E2F transcription factor 1 204 276 - -
Lele01g1191 561 PANTHER TRANSCRIPTION FACTOR E2F 179 483 IPR015633 GO:0000978|GO:0006357
Lele01g1191 561 Pfam E2F transcription factor CC-MB domain 290 389 IPR032198 GO:0046983
Lele01g1191 561 CDD E2F_DD 285 392 IPR032198 GO:0046983
Lele01g1191 561 Gene3D - 281 392 - -
Lele01g1191 561 SUPERFAMILY E2F-DP heterodimerization region 285 391 IPR037241 -
Lele01g1191 561 MobiDBLite consensus disorder prediction 426 446 - -
Lele01g1191 561 MobiDBLite consensus disorder prediction 171 207 - -
Lele01g1191 561 Gene3D - 204 276 IPR036388 -
Lele01g1191 561 SMART E2F_TDP_2 209 274 IPR003316 GO:0005667|GO:0006355
Lele01g1191 561 Pfam E2F/DP family winged-helix DNA-binding domain 211 274 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1191 Lele-ChrLele01 7109974 7116463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1191 49 478 E2F-DP Transcription Factor Family AT1G47870 44.118 2.05e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele01g1191 E2F_CC-MB 3.4e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1191 01 7109974 7116463 Lele01g1191 01 7109974 7116463 ECH
Lele01g1191 01 7109974 7116463 Lele03g1206 03 7082601 7088127 hybridization
Lele01g1191 01 7109974 7116463 Lele04g1443 04 19675616 19680580 hybridization