Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1179 ATGACACTCGAAGATTTCTTTACCTTGACTGAGATGAAAGATGGGCTTACAGCCCCTTCTCGAGTGCAGGAATTGGTCTCTGTGATGCAGAAGGAGAAAGATTGTGTTGTTAAGAATGTTGGCGATGCAATGAGGCAGTGGGCTGCTGTGGCAAGCACTATTGCTGCAACAGATAATAAAGACTGTCTTGCTCTTTTTATTCAATCAGATGGGCTATGGTTCCTTAATAGGTGGTTACAGGATGCTCAAAATGTTGGTGACACAAATGAAAGTTTCATTGAAGAGTCAATTACTGCACTGTTACGAGCAGTTGAAAAGTTGCATCTAGACTGTGAGAAGTCAATGTCATCAGGGATTTGGGTTACTGTAAACAATCTTCTCCGTCATCATAGCTCTAAGGTTCAGGATAGAGCAAGAGAATTATTTGACAGCTGGAAGGTGGGGGTAAATGGAGAAGCTGATTCTCATGATATGGAGCTTGTTAGGGCTGACAATGAGAATGACAAGATTGTTAAGGGGGAAGGCCAGCCATCTGCTCTGAATGAAGCTAATAATGAAAAAGACCGTACATCAGGAGTCGCTGCTGATGAGAAATCTCCATTGAAAAGCACAAGCAGTCTACAACCAGAAGGGAATTTTAGTGTACAAATACAGAGTTCTAGTAGTCAGCTCCATTCCTCTGGAAGTTTGGGTGGTGAAAACGTCAAAGAGAGATCACCAGACCATCTTGCTAATGTTTCAACTTCAACAAAGGAAGAATCTGCTCCTACAAAGGAAGAATCACCTTCATTTACTGTAAGTGAGACCCTTTCAGCTGGGTCCAATAGCTTTCCTCATCCAAAGCAAGGTAATTTTGAAGGAAAATCAGATGTAAATACTTTAAATGATTCATCCAAATTGGAGAAGCAGGAACAAAATTCCAATGGTCCTCTAGAAAAACTAGGAGCAGCAGATATTTCCTTGGGGTCAACAAAACCAGAGCCTGGACCTGGTCATATGGATGCTAGTGGAGCAAAAGCACCAGAAGTTGTGAATGAGCCTGTTTCAAATCATAATGTTGAAACCAATGAGGATATAGTCCGTCATAATGCCACCGCTGCAGGAAGCATGAAGACGCATGCATCAGATTGGAAGAGTGGGGTTGACGATACTAGAGCTCTAAAGTCTAGCAGTCCGCAACTCCCCAAGGCTGCCGAAAATGATGGCTGTTGTACTAATGCATTGCAGGAATCATCAGTAAGCGGTGGTAACTTGGGAAAGCCTGAGGTATTTGATATGTCTTCCTCCAGAACAGAAAGTGCCAGTGTTGTAAAGGAAGATTCAGGGCACATTAGTAATGAAGGCAAGGAAACTTCAAATGGTTTTGATCCTATTAAACCACGAAAACATCACCGTAGAACCCCTAATATGATTGTCAGGAAGAGTACTGATATTGAACTTGATTATGGCTCTGATGATGCTTTAGAAGTTGCTTTACAAGTTGCGCAAGAAGTTGAACGGGAGGTCTGCAGCTCTTCTGAGAAAATCTCAGAAGGAGAAACTGGGCAACCACATAGCCCAGATTCTGTAGGAAGAGAGGATGAATCCCCTTGTGTCGAACCTAGGGAGGTTACATCCAGACAAAGTTACTCTGCTGAGGTAGGTTCTAAGGAGGAGAGGCATGCTAATATTTCAGACGATGTTGAGGCAGGATGTGTTCCTGATGTGGAGTCCTCACATGTGACTGAATCAGCTTTAAATCCTGGAGGTAATCCAGAGAAAGGTTTTTGTGCTTTTGATCTCAATGAAGAATTAGGTTCTGATGATATGGATAATTCTGCAAATGTAAGGTCTACACTCATACCCATTGTATCTGCTTCAAAGCCTCCAGCAACTCCTGGGTTGCCTGTGGCCCCTTTGCAGTTTGAGGGGACACTTGGATGGAAAGGATCTGCTGCAACCAGTGCCTTTCGTCGTGCATCACCTCGTAAGAACTCTGACAGTGACAAGAATATTTCAATCAGTGGGAACTCTGATATTTCCAAGCAAAGGCTGGATTTCCTTGATATTGATCTGAATATAGCTGAGAGTGAAGATGGATTGGGAAAACAAATTGCCGAATCGTCTGGGCTTCCTTCTGCTCAATCTTCAGCTGAACTTAGTCCTATGAGATCAAGGAGGCTTGAATTGGATTTGAACAGTGCTGGTGATGATGGTGATGCTCAACCTTCAGATCAGAGGATGGAGGGACAGCTCTTATGTAACAGAATTGGCCATTGGAGCCCGTCACCTGCATCATCAACATCTTCAATGCAGCCGTCTGTTAGAAACATTGATTTGAATGACAGGCCATTCCTTCAGACTGATTTGGTGGACCAAGGGACCAGTAAGTCTTCTCATATTTTAAATGCATGTGGGGTTACTAAACCTGATGCACCTGTGATCTCTCTCTTGGGTACCAAAGTAGAAGTTGGTAGGAGAGAAACTAGGCCTTCTCCAAATGGCAAAGCTTCGGAGTCAGCAATGGATCTAACAATGTCAAGAGATGGTGTTTTAGGGATGGGCCCCGCAGTATCCTACAGCCATTCACCTGCATTTGGATATAATGGGCTAACAACAGTGTCTCCTTTGTCCTTTTCATCTGCAATGTATGGTTCAGGTGGCACAGTTCCATACATGGTGGACTCAAGAGGAGCCCCAGTTGTACCTCAGGTGGTGGGATCTTCCCCAACTATCCTGTCATCTTACACCCAGCCCCCATTCATGACGAACGTCACTGGCACGCAACTTGGTTTAAACGGGGTTGGGCCTTCACGTCCTAACTTTGACCTGAACTCTGGTTTCATGATTGAGGGAGGAAACAGAGACGCATTGGCTGCCAGACAATTTTTCTTTCCTGGTCAGAACAGGCCTATAGAAGAGCAAGGGAGGAACATTCACCAGCCCTCAAGTTCTGGGGTTGGTGGGAAAAGAAAGGAACCAGACAGTGGGTGGGAAACCTACCCATTCAGCTACAAACAACCGCCACCTCCATGGAAGTAG 3021 0.4442 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQKEKDCVVKNVGDAMRQWAAVASTIAATDNKDCLALFIQSDGLWFLNRWLQDAQNVGDTNESFIEESITALLRAVEKLHLDCEKSMSSGIWVTVNNLLRHHSSKVQDRARELFDSWKVGVNGEADSHDMELVRADNENDKIVKGEGQPSALNEANNEKDRTSGVAADEKSPLKSTSSLQPEGNFSVQIQSSSSQLHSSGSLGGENVKERSPDHLANVSTSTKEESAPTKEESPSFTVSETLSAGSNSFPHPKQGNFEGKSDVNTLNDSSKLEKQEQNSNGPLEKLGAADISLGSTKPEPGPGHMDASGAKAPEVVNEPVSNHNVETNEDIVRHNATAAGSMKTHASDWKSGVDDTRALKSSSPQLPKAAENDGCCTNALQESSVSGGNLGKPEVFDMSSSRTESASVVKEDSGHISNEGKETSNGFDPIKPRKHHRRTPNMIVRKSTDIELDYGSDDALEVALQVAQEVEREVCSSSEKISEGETGQPHSPDSVGREDESPCVEPREVTSRQSYSAEVGSKEERHANISDDVEAGCVPDVESSHVTESALNPGGNPEKGFCAFDLNEELGSDDMDNSANVRSTLIPIVSASKPPATPGLPVAPLQFEGTLGWKGSAATSAFRRASPRKNSDSDKNISISGNSDISKQRLDFLDIDLNIAESEDGLGKQIAESSGLPSAQSSAELSPMRSRRLELDLNSAGDDGDAQPSDQRMEGQLLCNRIGHWSPSPASSTSSMQPSVRNIDLNDRPFLQTDLVDQGTSKSSHILNACGVTKPDAPVISLLGTKVEVGRRETRPSPNGKASESAMDLTMSRDGVLGMGPAVSYSHSPAFGYNGLTTVSPLSFSSAMYGSGGTVPYMVDSRGAPVVPQVVGSSPTILSSYTQPPFMTNVTGTQLGLNGVGPSRPNFDLNSGFMIEGGNRDALAARQFFFPGQNRPIEEQGRNIHQPSSSGVGGKRKEPDSGWETYPFSYKQPPPPWK 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1179 1006 MobiDBLite consensus disorder prediction 197 233 - -
Lele01g1179 1006 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 62 156 IPR035441 -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 962 1006 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 156 339 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 701 715 - -
Lele01g1179 1006 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 154 IPR035441 -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 647 669 - -
Lele01g1179 1006 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 1006 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 424 470 - -
Lele01g1179 1006 Pfam TFIIS helical bundle-like domain 100 146 IPR017923 -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 259 310 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 367 400 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 520 534 - -
Lele01g1179 1006 ProSiteProfiles TFIIS N-terminal domain profile. 73 152 IPR017923 -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 424 440 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 503 563 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 697 717 - -
Lele01g1179 1006 MobiDBLite consensus disorder prediction 156 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1179 Lele-ChrLele01 7029590 7032610 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele01g1179 Med26 9.7e-07 No_clan