Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1156 ATGTTGGGAGATAAATCGGACAACGTGGTCTACCTTCATGGGGACCTTGATTTAAAAATTCTTGAGGCTCGCTGTTTGCCGAACATGGACTTGCTTTCGGAGCGTTTCAGTCAATTCTTTTCCCTCTTCAACTCCTGCACAACTTCATTTTCCGGTAGACGGAGACGCCATCGTCACAGACAGATCATTACCAGCGATCCTTACGTAAAAGTTTGCCTCGCCAAAGCTACGGTGGCTCGCACTCGTGTCATCTCCAACTCGCAGGATCCTACGTGGAATGAACATTTCAAAATCCCTCTCGCTCATCCCGTCTCGCGGGTCGAGTTCTACATCAAGGACAATGATTTATTCGGCGCTGATCTCATCGGAGTCGCTAGCGTCTCTGCCGAGAGAATCTTGTCTGGTGAACTCATCAGCGATTGGTTCCCCATACTTGGTTCTTATGGTAAACCGCCCAAACCTGATTGTGCCATTCGTCTCGAGATGAAATTCACGAAATGCGAGGATAGTCCACTGTACAGTTATGGAAGTTCTTCCAATCCGGACCGTTTCAAAGTGCGCGATTCTTATTTTCCTGTGCGTCATGGAGGATCGGTGACGTTATATCAGGACGCACACGTTCCAGAGTCGATGTTGCCGAAAATTGAATTAGAGAATGGCACTTTCTTCCAGCAAGGTAGATGTTGGGAAGATATATGTCATGCAATTTTGGAAGCGCACCATTTGGTTTACATTGTAGGGTGGTCCATCTACCATAAGGTGAAGCTGGTGAGGGAGCCGACGAGGCCCTTACCTAATGGTGGTGATTTAATTTTGGGGGATTTGCTAAAGTACAAGTCAGGAGAAGGTGCGCGCGTTTTATTATTGGTTTGGGATGATAAGACTTCACACAGCAAATTTTTCATTAATACGGATGGAGTAATGCATACACACGATGAAGAAACCCGAAAATTTTTCAAACACTCTTCGGTTTTCTGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCTTTATCAAACAGCAGGCATGCTTTAGTAGCTTTTTCCATATCTTGTCGTGTTTGTCCCAGAAAGTTCCTCCATGTTTTCATCATGCTTTTCTATCCTGCCCTTTGCCGGTTGTTGGAACCCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACAAGGCAATAACCGCAAGATAACTGCATTTATTGGTGGTCTAGACCTGTGTGATGGCCGGTATGATACACCTGAGCATAGACTTCTTCGAGATCTTAATACTGTTTATAAGGATGATTATCACAACCCTACATTTTCTGTTGGAATGAAGGAACTATGGGTTTCAAAGGAAGAAGATCCTGAAAACTGGCATGTTCAGATTTTTCGATCAATAGATTCAGGCTCATTGAAAGGATTTCCTAAGGATGTGTATGAAGCTGAAGCTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATTGACAATAGTATACAAACAGCATACATACAGGCTATCAGATCTGCCCAACATTTTATTTACATTGAAAATCAATATTTTGTTGGATCGTCTTTTGCATGGCCATCTTACAGAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATTAGAGCCAATGAGAGATTTGCTGTTTATGTTGTTATACCAATGTGGCCTGAGGGCGTCCCTTCTTCTGCCTCAGTTCAAGAGATTCTTTATTGGCAGGGACAAACTATGCAAACGATGTATGAAGTCATCGCACAAGAGTTGAAATCCATGGGCATTCACGATAGACGCCCAAGAGATTACCTCAACTTCTACTGTCTGGGAAATCGGGAGAACTTGCCGCCTGAAGTTTTAAATTCAATTAATTCAACTCCAAATAACTGTAGTGATACGGTTTCAGCTTCACAAAAGTTCCAACGCTTTATGATTTACGTGCACGCCAAGGGTATGATTGTGGATGACGAGTATGTTTTACTCGGTTCCGCCAATATCAATCAAAGATCCATGGCCGGTTCAAGAGATACAGAGATAGCAATGGGTGCATATCAACCCCATCACACATGGGGAAGGAAAGAGGCACATCCTCACGGTCAGGTTTACGGGTATAGAATGTCTTTGTGGGCAGAACATCTAGGGATGGTTGACGATTGCTTCAAGGAGCCTAAAAGTTTTGAATGTATGAAGAAAGTGAACAAGATTGCGAGTGAAAACTGGAAGAAGTACACGGCTAACGTGTTCAGTCCATTACAGGGGCACCTTCTGGAATATCCAATATATGTAGATGTGAATGGCAAGGTACGTCCCATACCTGGATTCGAAACTTTTCCTGACGTGGGTGGCAAGGTACATGGCAGCAGAACTACTCTTCCTGATGTCCTCACTACGTAG 2412 0.4362 MLGDKSDNVVYLHGDLDLKILEARCLPNMDLLSERFSQFFSLFNSCTTSFSGRRRRHRHRQIITSDPYVKVCLAKATVARTRVISNSQDPTWNEHFKIPLAHPVSRVEFYIKDNDLFGADLIGVASVSAERILSGELISDWFPILGSYGKPPKPDCAIRLEMKFTKCEDSPLYSYGSSSNPDRFKVRDSYFPVRHGGSVTLYQDAHVPESMLPKIELENGTFFQQGRCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPNGGDLILGDLLKYKSGEGARVLLLVWDDKTSHSKFFINTDGVMHTHDEETRKFFKHSSVFCVLSPRYASSKLSFIKQQACFSSFFHILSCLSQKVPPCFHHAFLSCPLPVVGTLFTHHQKCVIVDTQAQGNNRKITAFIGGLDLCDGRYDTPEHRLLRDLNTVYKDDYHNPTFSVGMKELWVSKEEDPENWHVQIFRSIDSGSLKGFPKDVYEAEAQNLVCAKNLVIDNSIQTAYIQAIRSAQHFIYIENQYFVGSSFAWPSYREAGADNLIPMELALKIVSKIRANERFAVYVVIPMWPEGVPSSASVQEILYWQGQTMQTMYEVIAQELKSMGIHDRRPRDYLNFYCLGNRENLPPEVLNSINSTPNNCSDTVSASQKFQRFMIYVHAKGMIVDDEYVLLGSANINQRSMAGSRDTEIAMGAYQPHHTWGRKEAHPHGQVYGYRMSLWAEHLGMVDDCFKEPKSFECMKKVNKIASENWKKYTANVFSPLQGHLLEYPIYVDVNGKVRPIPGFETFPDVGGKVHGSRTTLPDVLTT 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1156 803 SMART C2_3c 15 141 IPR000008 -
Lele01g1156 803 PIRSF PLD_plant 1 445 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele01g1156 803 PIRSF PLD_plant 439 803 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele01g1156 803 CDD C2_plant_PLD 9 165 - -
Lele01g1156 803 Gene3D Endonuclease Chain A 453 695 - -
Lele01g1156 803 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Lele01g1156 803 Pfam Phospholipase D C terminal 723 793 IPR024632 -
Lele01g1156 803 Pfam C2 domain 14 144 IPR000008 -
Lele01g1156 803 Gene3D Endonuclease Chain A 220 452 - -
Lele01g1156 803 SUPERFAMILY Phospholipase D/nuclease 494 731 - -
Lele01g1156 803 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 166 IPR035892 -
Lele01g1156 803 SMART pld_4 649 676 IPR001736 GO:0003824
Lele01g1156 803 SMART pld_4 378 413 IPR001736 GO:0003824
Lele01g1156 803 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 649 676 IPR001736 GO:0003824
Lele01g1156 803 PANTHER PHOSPHOLIPASE D 446 794 IPR015679 -
Lele01g1156 803 Pfam Phospholipase D Active site motif 650 676 IPR001736 GO:0003824
Lele01g1156 803 Pfam Phospholipase D Active site motif 379 413 IPR001736 GO:0003824
Lele01g1156 803 Gene3D C2 domain 9 165 IPR035892 -
Lele01g1156 803 SUPERFAMILY Phospholipase D/nuclease 184 448 - -
Lele01g1156 803 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 378 413 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1156 Lele-ChrLele01 6871224 6875762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1156 1 802 Phospholipase D Gene Family (Wang group) AT2G42010 45.861 0.0 775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1156 01 6871224 6875762 Lele01g1156 01 6871224 6875762 ECH
Lele01g1156 01 6871224 6875762 Lele03g1169 03 6844842 6850155 hybridization
Lele01g1156 01 6871224 6875762 Lele04g1402 04 19415626 19420724 hybridization