Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele01g1140 | ATGAAAGGCGACAAATCGAAGGCGGAATCTAAGAAAACTGATGCCAAGCTTGCCGTGAATAGGAAGGGCGCTGCCGCCACCAAGGCAGGCAGCAAACCAAGCAAGGGGAAGGCGGCGAAAGACCCTAACAAACCAAAGAGACCGGCCAGTGCCTTCTTCGTTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAATCCTGACAACAAAGCCGTGTCTGCTGTTGGAAAAGCTGCTGGGGCTAAATGGAAGTCCATGTCTGAAGCTGAGAAAGCACCCTACGTTTCTAAAGCAGAGAAACGAAAGGCTGAGTATGAGAAGAATATGAAAGCTTATAACAAGAGACAGGCGGAAGGTTCAAATGCTGCAGATGAAGAAGAATCTGAGAAGTCAATGTCCGAGGTTAATGATGCGGAGGGAGGAGACGAAGAGGGCAGTGATGAGGTCTGCTTAAATTTTAAGAGCACTAAGTTAGCTATGCTCATAAAGCTTTTAAAATTAATATCTCATGGGCTTTTATGTTGAGCTACCGGAAATATTGCCTTGACTAATCGTTTGCTTAGATTCTCAAGTTTTAAGTCACGATATGACGTTAGTTCCTGCCGTATTGCTATGTGGGTGGATTTAGGTTATGTTTTCGACATGAAAGGTGGCAAATCGAAGGCTGAATCTAAGAAAGCCGATGCCAAGCTTGCTGTGAATAAGAAGGGCGGCGCCGCCACCAAGGCTGGCAGGAAACCAAGCAAGGGGAAGGCGGCGAAAGACCCTAACAAACCAAAGAGACCGGCCAGTGCCTTCTTTGTTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAATCCTGACAACAAAGCAGTGTCTGCTGAGAAAGCGCCCTATGTAGCTAAAGCAGAGAAACGAAAGGCTGAGTATGAGAAGAATATGAAAGCATATAACAAGAGACAGGCGGAAGGTCCAAATGCTGCAGATGAAGAAGAATCTGATAAATCAGTGTCTGAGGTGAACGATGACGAGGAAGGAGATGAAGAGGGCAGTGATGAGGAGGAGGATGACGAGTAG | 1065 | 0.4601 | MKGDKSKAESKKTDAKLAVNRKGAAATKAGSKPSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKAVSAVGKAAGAKWKSMSEAEKAPYVSKAEKRKAEYEKNMKAYNKRQAEGSNAADEEESEKSMSEVNDAEGGDEEGSDEVCLNFKSTKLAMLIKLLKLISHGLLCXATGNIALTNRLLRFSSFKSRYDVSSCRIAMWVDLGYVFDMKGGKSKAESKKADAKLAVNKKGGAATKAGRKPSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKAVSAEKAPYVAKAEKRKAEYEKNMKAYNKRQAEGPNAADEEESDKSVSEVNDDEEGDEEGSDEEEDDE | 354 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele01g1140 | 354 | Coils | Coil | 296 | 316 | - | - | |
| Lele01g1140 | 354 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 45 | 114 | IPR009071 | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 110 | 144 | - | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Lele01g1140 | 354 | Gene3D | High mobility group box domain | 29 | 136 | IPR036910 | - | |
| Lele01g1140 | 354 | Pfam | HMG (high mobility group) box | 45 | 114 | IPR009071 | - | |
| Lele01g1140 | 354 | Pfam | HMG (high mobility group) box | 260 | 286 | IPR009071 | - | |
| Lele01g1140 | 354 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 4-RELATED | 1 | 145 | IPR031061 | - | |
| Lele01g1140 | 354 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 260 | 314 | IPR009071 | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 234 | 262 | - | - | |
| Lele01g1140 | 354 | SMART | hmgende2 | 259 | 315 | IPR009071 | - | |
| Lele01g1140 | 354 | SMART | hmgende2 | 44 | 115 | IPR009071 | - | |
| Lele01g1140 | 354 | Coils | Coil | 96 | 116 | - | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 110 | 138 | - | - | |
| Lele01g1140 | 354 | SUPERFAMILY | HMG-box | 32 | 119 | IPR036910 | - | |
| Lele01g1140 | 354 | Gene3D | High mobility group box domain | 255 | 318 | IPR036910 | - | |
| Lele01g1140 | 354 | SUPERFAMILY | HMG-box | 251 | 317 | IPR036910 | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 331 | 354 | - | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 295 | 330 | - | - | |
| Lele01g1140 | 354 | CDD | HMGB-UBF_HMG-box | 45 | 111 | - | - | |
| Lele01g1140 | 354 | MobiDBLite | consensus disorder prediction | 281 | 354 | - | - | |
| Lele01g1140 | 354 | CDD | HMGB-UBF_HMG-box | 260 | 311 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele01g1140 | Lele-ChrLele01 | 6770621 | 6776915 | Dispersed/Wgd |
Transcription factors information