Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1136 ATGTCTGGGTTCTTTCCCGTAAAGAAGGCCATGAATTTGCTTTGGGCTGTTTCTTGCGTGCTCGTGCTTTTCACAGTACCTCCATATGTGACCAGTGGTAATTCGTCGAGACCCGCCGTCGTGCATATCGGCGCTCTCTTCACCTTTGATTCTACCATTGGCAAAGTCGCTAAAATCGCGTTGGAGGAAGCGGTGAAGGATGTAAACGCCAATGCTAACGTACTCCCTGGAACTAAACTTGTCCTTACTGAGCAAAATTCCAATTGCAGTGGTTTCTTGGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTGGCAATCATAGGTCCACAATCTTCCGTTGTTGCTCACATAATATCTCATGTGGCAAATGAGCTTCAAGTCCCTCTGGTGTCATTTGCAGCGACGGACCCAACCCTATCCAACCTTCAGTTCCCTTTTTTTGTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGAAATTGTTGATTATTATGGTTGGAAGGAGGTCATTACTATTTTTATAGATGATGATTTTGGACGAAATGGCGTGTCAGCCTTGGATGATCAACTATCAGCTAGGCGCTGTAAAATCTCTTACAAGGCAGGAATTAGATCAGGACCTGCAGTTGATCGGAGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTAATGCAATCTCGGGTCATTGTTCTCCATGTAAATCCTGATTCAGGATTTATGGTTTTCAATGTTGCACAGTATCTTGGGATGACTGGGAATGGCTACGTATGGATAGCCACAGACTGGCTCTCCTCTGTTGTGGATTCTACTTCTCTCTCTTCAGATACAATGAGTGTTCTTCAGGGCGTTCTTGTTTTACGCCAACATACTCCTGATTCAGATGGGAAAAAATCCTTTATGTCTAGGTGGAACAAGTTAACTGGAGGCTCTGTGGGGTTAAGTTCTTATGGCCTTCATGCATATGATACTGTTTGGCTGCTTGCACATGCTATTGATACATTCTTCAACCAGGGTGGGATTATATCATTTTCTAACGACTCCAGGATACATGATGTTGACGAAAGTAATCTTAACCTTGAGGCAATGAGCATTTTTGACAATGGAACACTTCTCTTGAACAACATATTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGAGTCAGACAGATCTCTTGTTCGTCCTGCATATGATATTATCAACGTGGTGGGAACTGGGATTCGTCAGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCCATTGTACCTCCTGAGACATTGTATGCTAAGCCTCCTAATCGCTCGAGTGCAAACCAACGACTTCATTCTGTAATATGGCCTGGAGAAACACTATCAAAACCCCGTGGATGGGTTTTTCCAAATAATGGAAAACAATTGAGAATTGGTGTACCTATACGATTCAGTTACCGTGAATTTGTATCACCCATTCAAGGAACTGATATGTTCAAAGGTTTCTGCGTTGATATATTCACGGCAGCTGTAAACTTGTTACCGTATGCTGTTCCATATCGCTTTGTCCCATTTGGAGATGGCCGTAAAAACCCAAACTACGATGAACTTGTCAGGTTGATCACCACAGGGTACTTTGATGGTGCCGTTGGTGACATTGCCATTGTCACAAACCGGACAAAGGTTGTAGATTTTACACAGCCATATATTGAATCTGGACTTCTTGTGGTGGCTCCTTTTAAGAAAACAAACTCTGGTGGATGGTCTTTTCTGCGGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTCTTTCTTCTTTTTCATTGGGATAGTAGTATGGATTCTGGAGCATAGAATAAACGACGAATTCAGGGGTCCACCTAGACAGCAAATTATCACCATTTTATGGTTTAGCTTGTCAACTCTATTCTTCGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTAATCATATGGCTGTTTGTGGTTTTGATAATCAATTCCAGCTACACAGCAAGTTTGACATCAATCCTCACAGTGCAGCAACTATCTTCTACCATCAATGGAATAGACAGCTTAAAAGCTGGTGATGAACCTATAGGGTATCAAGTGGGTTCATTCGCAGAGCATTATTTGGCTGATGATATTGGAATATCCAAATCCAGGCTTCTTCCTCTTGGATCTCCTGAAGAATATGCCAAGGCTCTCCAGCTTGGTCCTGAAAATGGAGGTGTTGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTATCCACCCAATGCAGTTTCAGGATAGTAGGTCAGGAGTTCACCAGAAGCGGTTGGGGATTTGCATTCCCACGGGACTCCCCTCTGGCCATTGACTTGTCAACTGCAATTCTACAACTTTCTGAAAATGGTGAACTGCAGCGGATTTATGATAAGTGGCTCGTAGGAAGAGCCTGCAGTACGGATGATACTGAGATTGATTCAGATCGGCTTCGGTTTAAAAGCTTCTGGGGTCTCTTTCTCATATGTGGGATTGCTTGCGTTATCGCTCTTTGTATCTATTTTTTGCAGATTATGCTGCAGTTACGCCATTCTCCTCCTGCTGAACCAGCTTCTTCCAATGGAAGCTCATCGGTTTTGAGACATCTTCGAAGATTTGTTTCACTGATCGACGAGAAGGAAGAACGGTCCAATAACAGCAGTAGAAAGAGGGTTGAAGCCCAAAGATCACCAGAAGAAGATGGATTGGGGAGGCGGTTAAAGAGGTTACAAACAGAAACAAGTCAAACAAGTTCTCAATTCAGTTTTAGAGTACAAAATGATCAGTTTCGAAAGTTACATCACGTAATGATATGCTTAGATGTCAACCATCTCATCTGA 2886 0.431 MSGFFPVKKAMNLLWAVSCVLVLFTVPPYVTSGNSSRPAVVHIGALFTFDSTIGKVAKIALEEAVKDVNANANVLPGTKLVLTEQNSNCSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELQVPLVSFAATDPTLSNLQFPFFVRTTMSDLYQMAAVAEIVDYYGWKEVITIFIDDDFGRNGVSALDDQLSARRCKISYKAGIRSGPAVDRSEITDLLVKVALMQSRVIVLHVNPDSGFMVFNVAQYLGMTGNGYVWIATDWLSSVVDSTSLSSDTMSVLQGVLVLRQHTPDSDGKKSFMSRWNKLTGGSVGLSSYGLHAYDTVWLLAHAIDTFFNQGGIISFSNDSRIHDVDESNLNLEAMSIFDNGTLLLNNILQSNFVGLTGPVKFESDRSLVRPAYDIINVVGTGIRQVGYWSNYSGLSIVPPETLYAKPPNRSSANQRLHSVIWPGETLSKPRGWVFPNNGKQLRIGVPIRFSYREFVSPIQGTDMFKGFCVDIFTAAVNLLPYAVPYRFVPFGDGRKNPNYDELVRLITTGYFDGAVGDIAIVTNRTKVVDFTQPYIESGLLVVAPFKKTNSGGWSFLRPFTPLMWIVTASFFFFIGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVIIWLFVVLIINSSYTASLTSILTVQQLSSTINGIDSLKAGDEPIGYQVGSFAEHYLADDIGISKSRLLPLGSPEEYAKALQLGPENGGVAAIVDERPYVEIFLSTQCSFRIVGQEFTRSGWGFAFPRDSPLAIDLSTAILQLSENGELQRIYDKWLVGRACSTDDTEIDSDRLRFKSFWGLFLICGIACVIALCIYFLQIMLQLRHSPPAEPASSNGSSSVLRHLRRFVSLIDEKEERSNNSSRKRVEAQRSPEEDGLGRRLKRLQTETSQTSSQFSFRVQNDQFRKLHHVMICLDVNHLI 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1136 961 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 895 - -
Lele01g1136 961 PRINTS Metabotropic glutamate GPCR signature 176 193 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele01g1136 961 PRINTS Metabotropic glutamate GPCR signature 109 135 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele01g1136 961 PRINTS Metabotropic glutamate GPCR signature 160 176 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele01g1136 961 PRINTS Metabotropic glutamate GPCR signature 141 160 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele01g1136 961 Gene3D - 59 404 - -
Lele01g1136 961 Gene3D - 764 823 - -
Lele01g1136 961 CDD GluR_Plant 474 816 - -
Lele01g1136 961 Gene3D - 156 429 - -
Lele01g1136 961 FunFam Glutamate receptor 156 310 - -
Lele01g1136 961 Pfam Receptor family ligand binding region 59 414 IPR001828 -
Lele01g1136 961 FunFam Glutamate receptor 471 586 - -
Lele01g1136 961 MobiDBLite consensus disorder prediction 895 921 - -
Lele01g1136 961 SUPERFAMILY Periplasmic binding protein-like I 35 467 IPR028082 -
Lele01g1136 961 Gene3D - 586 713 - -
Lele01g1136 961 SUPERFAMILY Periplasmic binding protein-like II 452 817 - -
Lele01g1136 961 SMART GluR_14 477 818 IPR001320 GO:0015276|GO:0016020
Lele01g1136 961 FunFam Glutamate receptor 587 717 - -
Lele01g1136 961 Coils Coil 892 912 - -
Lele01g1136 961 CDD PBP1_GABAb_receptor_plant 42 433 IPR044440 -
Lele01g1136 961 FunFam Glutamate receptor 713 820 - -
Lele01g1136 961 Pfam Ligand-gated ion channel 817 849 IPR001320 GO:0015276|GO:0016020
Lele01g1136 961 Pfam Bacterial extracellular solute-binding proteins, family 3 496 816 IPR001638 -
Lele01g1136 961 PIRSF IGluLR_plant 9 953 IPR017103 -
Lele01g1136 961 Gene3D - 471 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1136 Lele-ChrLele01 6741804 6750088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1136 34 909 Ion Channels AT1G42540 65.650 0.0 1243