Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1127 ATGGCATACCACCAGATTCAGGGTCATCCGCCCACGCCTGGATCCAATTCAAGTTCCGGTTTTCAACCAATAAGCTCACCTTTTGGTGATACAACTTTTACCAAGGTGTTTGTTGGAGGATTAGCTTGGGAGACCCAGAGCGAAACCATGCGCCGATACTTTGAGCAGTTTGGCGACATTCTTGAAGCTGTTGTAATTACGGATAGGAATACAGGGCGATCCAAAGGCTATGGTTTTGTGACTTTCCGGGATCCTGAGGCTGCTAGAAGAGCCTGTGCTGATCCAAGTCCTATCATTGATGGAAGGAGGGCCAATTGTAACTTGGCTTCACTTGGACGACCGTGGCCTTCTCTTCCACATGGTATACTTCCCACTGCTGTTTCCAGTATCTTTGCTTCATTTTCTGCCATTCATGTTATAATTATTCATTTGAACATACCAATTCTGTTTGCGATGCAAAGGCGGTTAAGGCCAGCTCCTGCTTACATTGGAAATTTGCAACCAGCCCGAGCGATTCCTTTGAAAGTTGGTGGACTTGGTCAAAGTACAGTGATGTCACATGTTATGATCGGAAATTGCAGGAACGCAAATGTGCTAGTTGCAGGAGATATGTATACAACATATGGACCTGAATATGCATACCCACAGGGTTTGTACAACCCATACATGGGCCAGCAGTATGTTCAGATATATGGAGTGCCTGGTGCAGTGAATAATACTATTTATCCTTATGGGCAGTTAGGTCAAGCTATTCCGAGTAGTCATGGTTATGCAGGAATGCAGGGCTATGCTGTAACTGGTCATCACATTGTACCTTATGGCGGAACCAATGTTAATGCCCTGACTACTTCACCTATGCCTACCATTCAAGTACCATATCCCAGTGCCAGTGGTATACTTGAATTGCTGCACCAATTCCAGGACAACCACAATTTATTGTCCCTGCGCCTTCTCAGTTTATGCAAGGGGCTGGCCCTGACCAAGCAGCTGGATGAGGGGGCGATTAAGGTATCCTTAGTTTGCAGCAGGACTAAGGGCAGTGGATCTGCTACATCTGTGGCGGGCTTCCAATCTAGCCTTGCATGTTATATATATTGCATTCTAGAGGTACAGCTGGCAAACTTATCTGTATTGGTTATATTTAGTCATGCTCACCATCACCATCAAGTTGGGTCGGCGGTGCTCCAGATGGCGGAGAAGGACACTGGGAGATGCAGGCTGCATTTCCATTTGTCCATTTTGTATGATGTATTTATACCCCATGCTACCAGCACTCAGGAAGAGTGGCAGTAG 1293 0.4617 MAYHQIQGHPPTPGSNSSSGFQPISSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDRNTGRSKGYGFVTFRDPEAARRACADPSPIIDGRRANCNLASLGRPWPSLPHGILPTAVSSIFASFSAIHVIIIHLNIPILFAMQRRLRPAPAYIGNLQPARAIPLKVGGLGQSTVMSHVMIGNCRNANVLVAGDMYTTYGPEYAYPQGLYNPYMGQQYVQIYGVPGAVNNTIYPYGQLGQAIPSSHGYAGMQGYAVTGHHIVPYGGTNVNALTTSPMPTIQVPYPSASGILELLHQFQDNHNLLSLRLLSLCKGLALTKQLDEGAIKVSLVCSRTKGSGSATSVAGFQSSLACYIYCILEVQLANLSVLVIFSHAHHHHQVGSAVLQMAEKDTGRCRLHFHLSILYDVFIPHATSTQEEWQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1127 430 MobiDBLite consensus disorder prediction 1 24 - -
Lele01g1127 430 Gene3D - 3 116 IPR012677 -
Lele01g1127 430 CDD RRM_RBM24_RBM38_like 34 109 - -
Lele01g1127 430 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 111 IPR000504 GO:0003723
Lele01g1127 430 SUPERFAMILY RNA-binding domain, RBD 9 116 IPR035979 GO:0003676
Lele01g1127 430 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 92 IPR000504 GO:0003723
Lele01g1127 430 MobiDBLite consensus disorder prediction 9 24 - -
Lele01g1127 430 PANTHER BOULE-RELATED 15 290 IPR037366 -
Lele01g1127 430 SMART rrm1_1 35 107 IPR000504 GO:0003723
Lele01g1127 430 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 28 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1127 Lele-ChrLele01 6683412 6687063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1127 24 110 C2H2 Transcription Factor Family AT2G19380 40.230 3.95e-15 75.5