Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1114 ATGCCTGGGAATAAGGAGATGGGGGAGGCGGTGAGGGAGGAAGGCGAGAAGAAAAGGAAGCAAATGTTGTCGTTTTCGAGCCCGTCTTCGTCTTCGTCGTCGACTTCGCATGATAGAGAGTATGAAGTTCAGGACCTGAGAGACAGGTTGAAATCGTCGCAAGGAAGCCGATTCCAATTGCTTGAGCATGAGTTGGAGGAGCTCAACCAGAAAAAATTCAGTCGCCACGTCCTTGATGGCATCCGAGGCTTCTCCAAAGATTTCACCATTCATCCAGAGAACAGGTGGTATCGGGCATGGACAAAATTCATATTGCTGTGGGCAATATACTCGTCCTTCTTCACACCAATGGAGTTTGGATTTTTTCGTGGGCTAGACGAGGATCTCTTTATACTGGACATAATTGGCCAAGTTGCATTTCTTGCAGACATTTTTATCCAGTTCTTCGTTGCTTATATTGACAGTCAGACCTATCGTATGATCTACAAGCCAGCCCCTATAGCTCTTCGGCTGGAGAAGGATATACGTATCAATTACATGTTTACTAGGATTGTGAAACTTATGGTAGTTGAACTCTACTGCACCCATACAGCTGCCTGCATCTTCTACTACTTGGCCACCACACTACCTCCATCCCAAGAGGGGTACACATGGATAGGAAGTTTAAAGCTGGGCGACTACAGTTATATGAATTTCAGAGACATTGATCTTTGGAAGCGTTACACAACATCTTTGTATTTCGCTATTGTTACAATGGCCACTGTTGGCTATGGAGACATACATGCAGTAAATATGAGGGAGATGATATTCATAATGATATATGTTTCGTTTGATATGGTTCTCGGTGCTTATTTAATTGGTAACATGACAGCTTTAATAGTCAAAGGATCAAAAACAGAAAAGTTTAGGGATAGAATGGCAGATCTTTTGAAATACATGAATAGAAACAGACTTGGAAGGGACATTCGTGAACAAATAAAAGGCCATATGCGCTTACAGTATGAAAGTAGCTACACTGAGCCAGCTGCCATTCAGGAACTGCCCATGTCAATTCGCTCCAAGATATCAAAAGAGTTATACTTGCCATACATCCAGAAGGTCCCGCTCTTTAAGAATTGCTCTTCAGAATTTATCAATCAGATCGTTATCAGGCTCCATGAGGAATTCTTTCTCCCAGGAGAAGTGATACTGGAACAAGGAAATGTTGTAGATCAACTATACTTCGTGTGTCATGGTGTGCTGGAGGAAGTAGGCCCCGGTGAAAATGGATCTGAAGACACCGTTTCACTTTTAGAGCCTAACAGTTCATTTGGGCATACATCTGTTCTGTGTAACATTCCTCAACCATATACTGTTCGGGTTTGTGAACTGTGTAGGCTTCTACGGCTTGATAAACAATCATTTACGGATATCCTTGATATATACTTCTATGATGGGAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGACTCTAGTCGTGGTAAGCAATTGGAGTCTGATATCACGTTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAATAATGCAGCTTTTAATGGGGATCTGAATCATCTTAAAGGATTGATTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGACGGTCACCGTTGCATCTTGCAGCATCTAGAGGATATGAAGACATCACCTATTTCCTTATTCAGGATGGTGTAGACATCGATATGAGAGATAACTTTGGGAACACGCCCTTACTTGAAGCTGTAAAGAATGGAAACGATCGAGTTGCTTCTTTACTCGTTGGAAAAGGGGCGTCTATGAACATAGAAGACGCCGGTAGTGTTCTATGTAATGCTGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGTTATTATCTTATGGCATGGATCCTAACACGAAAGATTACGATTACCGAAGCCCTCTTCATGTTGCTGCAGCTGAGGGTTTATTCTTAATGGCAGAGTTTCTGATAGAAGCTGGAGGTAGCGTTTTTATCCAAGACAGATGGGGAAATACTCCACTTGATGAAGCCAGGACGTGTGGAAATCAGAATCTGATCAAACTGTTGGAAGATGCAAAGTCTGCTCAGTTGTCAAAATTCCCTCATCTCTCCTCAGAACTTACAGATAAATTACACCCTAAGAAATGTACAGTATTTCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGGCATGGGATTGTACTATGGGTTCCACACACCAGTGAAGAGCTTATAGCAAGAGCAGCAGAGCAGCTAGAAGTTTCTAGGGATTGTTCTATTCTATCAGAGGATGCTGGTAAAATTACTGATGCGAACTTGATTATGGATGGTCAAAAGCTGTATCTAGACATTTATGCCCCCAGCAATACCTCTTCTTTCGAATCGCTCTTCGTGCGCGCCAAGTCTGAACGACTGGACCCGGGTCCTTTAACCATGTCTTTCTCTCTATTTGAAGCGTGTAGGAAGAGAAAGAGATTGCCCAAGGTTTTCAGGTTTCACTCTTTCGGCGACCCTGGTTGCCCCATCAGTCCTAACGGACCTTTCAGAGATAACATTCGTCTCTTTCTTCAAGAATGCGGAGAGCTTGAAGATTTCCAGATCCAGGGCATGCCTCTGTGGACCACCTTCCTTATTCATGAGAAATCAAACTCTCTGACCCCTCTTTACACCATTGAAGAGAATGTATACCACTCTACGCACCCCTTCTGCGATCATTGCCGATGTGCAGGCTGGAGCGGCCATTTTGTATCGAAGAGAAGGTACCATTTCATAATCACCGCCGATAATAAACCGTTGACTGAAGGTTTTCTTGATAATCAGAGCCATCTCCTGCATGGAATGATTCATTGCAATGGGTACGGCCATTTGCTCTGTGTTAATGGCATTGAAGGGGGCTCTAAATTCCTCAGTGGCAGAGAAATCATGGGTCTGTGGGACAGGATCTGTACAATTCTTCGAACAAGGAAAATCGCAGTTGAAGATGCGTCAAAGAAGCGTTTAATGGATCTTCGCCTACTTCATGGAGTTGCTTATGGCCATTCTTGGTTTGGTAGGTGGGGTTACAGATTTTCTCGTGGAAGCTTTGGTGTCACAGAGCACAATTATAATGCAGCAATCGAAGTTCTAAGTTCGTTAGAGCTTGATGAAATCGTTCAATGTTTTGGTAATACAATGTGCCATAAAGAAATCAAAGAAATTATTCGCCACTATAGAGACATGAGTGAAACCCAGTTGATTACAATCAAGGATCTTCTCAGGTTTATGCTTACCGTCAAGTCTCGAACTCTTCCACCACCCAAGAGACTAGTAGTCAATATCACTGCTCCTCCTCCTTCAACCTTCTGTACAAAAAGCTCAATGAAATTTGCAATGTCAAACAAACAAGGCCCATTAAAGGAAAAATCAGTGAGGTACAAAAAGTTCAGTTCTGCAGTGGCTAATATGGATAGTAGGTGGCCTTCAAGGCGCCTTGAATACGCAGCCCAAGTGATAGTAGATGCATTGAAAGAAAACAAAGCAAATAGTTCAGGTTCTGGTGGGATGACTAGGCAAGATGTAAGAGATGCAGCTAGGCTCCACATTGGTGACACAGGCTTGCTGGATTATGTGCTGAAATCACTGAATAATATGATTGTTGGAAACTACGTTGTCCGTCGAATGGTCAACCCCACAAGTCGAATCCTAGAGTATAACATTCATGAGCTGGGAAATGGGTCTAAATCCCCTGAAGTACGTCCTGGGCTGAAGGTTTTTAATTATATGGAACCTCCAGCAGAGTCAGAACAAGTGCCAGGAATTGATGTTTACTGTGATGTAGCTTATCTGTACAAGAATGTCCTATTGGGCTACCCAGATTCAGAACAAGCAGACTTGGCGGTTCAAACAATTCTAGACAGTAGGCATTTTGTGAAGGAATGGACATTAATCGATGAAATAGAGCAAGTTTTGACATTCATATGCCGCTTGATACCCAACTTTGTTGATGACAAACCAGAGAGGAACAAGGAAGTAACCCCAGGTGAGATAGTGATGGTTCCACTGCATGCTACAGTTGGAGACTTGAAGCAAGCAGCTGAGACTGCTATGAGGGATACTTATTGTATTGCAGAGAGAATCATGGTGATAGAGATCGCAGAGTTGGTCGGAATAAGTGATGAGGAAGTGCTTTTTGGAGTAGTGGAGTCTGGTGTGGATCTGCGTGTGAGGGGAATTGGTTTAGATTTGATTACTCCATTGAAGTATCAGGGAGGATCAGACAACTGGAAGGTGAGATGTGAATGTGGAGCTCAAGATGATGATGGTGAGAGAATGGTGGCATGTGACATATGTGAGGTGTGGCATCACACACGGTGCTGTGGGATAGATGACTCAGAGACTGTGCCACCATTGTTTGTGTGCACTGCTTGTTGTGATTCACTTGTACCTCCAAAGGTTGATTCTGCTTTTAGCAGCAGCAGCAGCATGGACTGTGCTGATGATTATCTGATTTCCACAGAGCCTAATAACTTTCTGGAATATGGTTATGGGTACTGA 4554 0.4306 MPGNKEMGEAVREEGEKKRKQMLSFSSPSSSSSSTSHDREYEVQDLRDRLKSSQGSRFQLLEHELEELNQKKFSRHVLDGIRGFSKDFTIHPENRWYRAWTKFILLWAIYSSFFTPMEFGFFRGLDEDLFILDIIGQVAFLADIFIQFFVAYIDSQTYRMIYKPAPIALRLEKDIRINYMFTRIVKLMVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLKLGDYSYMNFRDIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMADLLKYMNRNRLGRDIREQIKGHMRLQYESSYTEPAAIQELPMSIRSKISKELYLPYIQKVPLFKNCSSEFINQIVIRLHEEFFLPGEVILEQGNVVDQLYFVCHGVLEEVGPGENGSEDTVSLLEPNSSFGHTSVLCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDSSRGKQLESDITFHIGKQEAELALKVNNAAFNGDLNHLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITYFLIQDGVDIDMRDNFGNTPLLEAVKNGNDRVASLLVGKGASMNIEDAGSVLCNAVARGDSDYLKRLLSYGMDPNTKDYDYRSPLHVAAAEGLFLMAEFLIEAGGSVFIQDRWGNTPLDEARTCGNQNLIKLLEDAKSAQLSKFPHLSSELTDKLHPKKCTVFPFHPWDPKEHRRHGIVLWVPHTSEELIARAAEQLEVSRDCSILSEDAGKITDANLIMDGQKLYLDIYAPSNTSSFESLFVRAKSERLDPGPLTMSFSLFEACRKRKRLPKVFRFHSFGDPGCPISPNGPFRDNIRLFLQECGELEDFQIQGMPLWTTFLIHEKSNSLTPLYTIEENVYHSTHPFCDHCRCAGWSGHFVSKRRYHFIITADNKPLTEGFLDNQSHLLHGMIHCNGYGHLLCVNGIEGGSKFLSGREIMGLWDRICTILRTRKIAVEDASKKRLMDLRLLHGVAYGHSWFGRWGYRFSRGSFGVTEHNYNAAIEVLSSLELDEIVQCFGNTMCHKEIKEIIRHYRDMSETQLITIKDLLRFMLTVKSRTLPPPKRLVVNITAPPPSTFCTKSSMKFAMSNKQGPLKEKSVRYKKFSSAVANMDSRWPSRRLEYAAQVIVDALKENKANSSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNMIVGNYVVRRMVNPTSRILEYNIHELGNGSKSPEVRPGLKVFNYMEPPAESEQVPGIDVYCDVAYLYKNVLLGYPDSEQADLAVQTILDSRHFVKEWTLIDEIEQVLTFICRLIPNFVDDKPERNKEVTPGEIVMVPLHATVGDLKQAAETAMRDTYCIAERIMVIEIAELVGISDEEVLFGVVESGVDLRVRGIGLDLITPLKYQGGSDNWKVRCECGAQDDDGERMVACDICEVWHHTRCCGIDDSETVPPLFVCTACCDSLVPPKVDSAFSSSSSMDCADDYLISTEPNNFLEYGYGY 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1114 1517 MobiDBLite consensus disorder prediction 22 37 - -
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Lele01g1114 1517 ProSiteProfiles cAMP/cGMP binding motif profile. 369 489 IPR000595 -
Lele01g1114 1517 SMART ANK_2a 609 638 IPR002110 GO:0005515
Lele01g1114 1517 SMART ANK_2a 675 705 IPR002110 GO:0005515
Lele01g1114 1517 SMART ANK_2a 642 671 IPR002110 GO:0005515
Lele01g1114 1517 SMART ANK_2a 578 607 IPR002110 GO:0005515
Lele01g1114 1517 SMART ANK_2a 545 574 IPR002110 GO:0005515
Lele01g1114 1517 SMART ANK_2a 506 541 IPR002110 GO:0005515
Lele01g1114 1517 Pfam Ion transport protein 164 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat region circular profile. 578 609 - -
Lele01g1114 1517 Gene3D Jelly Rolls 339 502 IPR014710 -
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat region circular profile. 545 577 - -
Lele01g1114 1517 SUPERFAMILY Voltage-gated potassium channels 92 294 - -
Lele01g1114 1517 FunFam Potassium channel KAT2 357 494 - -
Lele01g1114 1517 Gene3D - 159 295 - -
Lele01g1114 1517 Pfam Cyclic nucleotide-binding domain 389 473 IPR000595 -
Lele01g1114 1517 PRINTS Ankyrin repeat signature 546 561 IPR002110 GO:0005515
Lele01g1114 1517 PRINTS Ankyrin repeat signature 594 608 IPR002110 GO:0005515
Lele01g1114 1517 MobiDBLite consensus disorder prediction 1 43 - -
Lele01g1114 1517 Pfam KHA, dimerisation domain of potassium ion channel 720 789 IPR021789 -
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat profile. 545 577 IPR002110 GO:0005515
Lele01g1114 1517 ProSitePatterns Zinc finger PHD-type signature. 1432 1476 IPR019786 -
Lele01g1114 1517 SUPERFAMILY cAMP-binding domain-like 297 486 IPR018490 -
Lele01g1114 1517 Pfam Ankyrin repeats (3 copies) 614 696 IPR002110 GO:0005515
Lele01g1114 1517 Pfam Ankyrin repeats (3 copies) 519 609 IPR002110 GO:0005515
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat region circular profile. 642 674 - -
Lele01g1114 1517 SUPERFAMILY Ankyrin repeat 518 697 IPR036770 -
Lele01g1114 1517 CDD CAP_ED 369 483 IPR000595 -
Lele01g1114 1517 ProSiteProfiles KHA domain profile. 721 807 IPR021789 -
Lele01g1114 1517 CDD PHD_MMD1_like 1432 1476 - -
Lele01g1114 1517 ProSiteProfiles Ankyrin repeat profile. 642 674 IPR002110 GO:0005515
Lele01g1114 1517 SMART PHD_3 1431 1477 IPR001965 -
Lele01g1114 1517 Gene3D - 610 705 IPR036770 -
Lele01g1114 1517 SUPERFAMILY FYVE/PHD zinc finger 1417 1480 IPR011011 -
Lele01g1114 1517 Gene3D - 503 609 IPR036770 -
Lele01g1114 1517 SMART cnmp_10 369 487 IPR000595 -
Lele01g1114 1517 MobiDBLite consensus disorder prediction 7 21 - -
Lele01g1114 1517 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1419 1480 IPR013083 -
Lele01g1114 1517 PANTHER POTASSIUM CHANNEL AKT1 71 170 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1114 Lele-ChrLele01 6544646 6555505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1114 588 695 Ion Channels AT5G37500 33.333 3.61e-09 59.7