Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1113 ATGAAAAAGATGAGTGCTTCTTCCTCCAGAAAAGAGGACAAGGTTGAACAAGTGGCCCAACGTAGGATCCACAAGCCCAGGTGGCTTGAGCCTATTCTGAAGAAAACTTTCTTTGATTCTTGTGAAGCTCATCCTATGTACAAGAATGAACTGAACAAATACTGTATGACCTGCAACAAGTCTGCTTGCCAATATTGTGTGTCTCATGGCATTCATCGATGCCACAAGATGCTTAACATTTATAAACATGTCTACAAATATGTTGTCGCCTTAGCTGCTGTTGAAAAGCATATTGACTGTTCAAAAATTCAGCAGACCTACAAATGCAACAAGCGATTGGCTATTGCTCTGAATCCTCTTCCACATGGCGGTTCGGCATCAGATACTGAGCCATTATGTGAGATCTGTGCTAGAAAGCTGACTGACCCTCATTTGTTTCGTTACTGCTCCATTTCATGCAAGGTTCAAGCTGTTTTAAGGAAACCCAAAGATTCACTTCCTCCCTTCATTACCATCCAGCGCCCTTCTAAGGCAAAGAAAGGGGAAGCTTCTGAGCCCCCGAAGCCTACAAACAAAAGAAAGGGAACACCCCGTAGGGCTCCCTTATTCTGA 612 0.4363 MKKMSASSSRKEDKVEQVAQRRIHKPRWLEPILKKTFFDSCEAHPMYKNELNKYCMTCNKSACQYCVSHGIHRCHKMLNIYKHVYKYVVALAAVEKHIDCSKIQQTYKCNKRLAIALNPLPHGGSASDTEPLCEICARKLTDPHLFRYCSISCKVQAVLRKPKDSLPPFITIQRPSKAKKGEASEPPKPTNKRKGTPRRAPLF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1113 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 200 - -
Lele01g1113 203 ProSiteProfiles Zinc finger B-box type profile. 41 80 IPR000315 GO:0008270
Lele01g1113 203 MobiDBLite consensus disorder prediction 178 192 - -
Lele01g1113 203 CDD Bbox2 41 80 - -
Lele01g1113 203 SUPERFAMILY B-box zinc-binding domain 40 91 - -
Lele01g1113 203 MobiDBLite consensus disorder prediction 166 203 - -
Lele01g1113 203 MobiDBLite consensus disorder prediction 1 20 - -
Lele01g1113 203 Pfam PLATZ transcription factor 82 155 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1113 Lele-ChrLele01 6541127 6544003 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele01g1113 PLATZ 8.5e-17 No_clan