Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1109 ATGCCCTTACAAGGGATTGCAATCGAGCCCAGCAGTTCCACATGTTCGCCTCCCGATCTTTCCCTTCACATAAGCCCTCCAACTTCTTCTAATTTGGTAACTCAAGCTCGCACTGAGCTCTCTCTAGCGACCAATTTCTGCACAGACCAACCTCCTCATTATCATCATCCTCACAATCACAACCACACCACAACCTCTCACGTCAACCACCACATGAATTCTTTGCTCGATGCGTCGTCGCCGTCGGACGTCGGCCTAATGAAACCGATCAAGGGGATCCCGGTGTATCATCATCATTATCAGAAGATGTGGTTGCATCATCATCCCTTGCCATCTAACAGTTCTTCTTCCTCTTCTTGGGCTTATAATACGATGGGAGTATCAGGTTTTGATAATCCGATGTGGGTGTTAAACGGGTCATCGCCAGGGAATTTCAAATCTCATCCTCAGTTGCACTGTGGGCTTGGGATTGGGGCTTCTCACCATCATCATCATAGTGAAGTAGAGGCCACATCATCGGGGTTCATGAGATCCCGATTTATGCCTAAGCTACCTACCAAGAGAAGCATGAGAGCTCCTAGAATGCGTTGGACCACCACCCTCCATGCCAGATTCGTTCACGCCGTTCAACTTCTTGGCGGCCATGAAAGAGCTACCCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACCTTAGCTCATGTTAAAAGCCACTTGCAGATGTATCGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGTGAAGATGACTTGTCTCCCGTTGGTGGCAACAATGCCGATTGTGGTGGTCTTCGTCAGATTTCCGATCAAAGAGGCCGAGCAGATCGGTATGTGCAACAACAAGACATAGACCATCCCTCTTCTACTACTCTGTGGAGCAATTCTTCAAGTATTACGAAGTTGTCAACAATTCAAAATGTTACATAG 978 0.4785 MPLQGIAIEPSSSTCSPPDLSLHISPPTSSNLVTQARTELSLATNFCTDQPPHYHHPHNHNHTTTSHVNHHMNSLLDASSPSDVGLMKPIKGIPVYHHHYQKMWLHHHPLPSNSSSSSSWAYNTMGVSGFDNPMWVLNGSSPGNFKSHPQLHCGLGIGASHHHHHSEVEATSSGFMRSRFMPKLPTKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDLSPVGGNNADCGGLRQISDQRGRADRYVQQQDIDHPSSTTLWSNSSSITKLSTIQNVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1109 325 MobiDBLite consensus disorder prediction 250 310 - -
Lele01g1109 325 FunFam Myb family transcription factor 191 249 - -
Lele01g1109 325 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 193 246 IPR006447 GO:0003677
Lele01g1109 325 MobiDBLite consensus disorder prediction 1 21 - -
Lele01g1109 325 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 319 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele01g1109 325 Pfam Myb-like DNA-binding domain 194 245 IPR001005 -
Lele01g1109 325 SUPERFAMILY Homeodomain-like 190 246 IPR009057 -
Lele01g1109 325 MobiDBLite consensus disorder prediction 250 264 - -
Lele01g1109 325 Gene3D - 192 249 - -
Lele01g1109 325 MobiDBLite consensus disorder prediction 7 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1109 Lele-ChrLele01 6515707 6518125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1109 1 316 G2-like Transcription Factor Family AT5G16560 42.090 1.31e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele01g1109 Myb_DNA-binding 1.2e-05 CL0123