Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1102 ATGTTGCAGAATCGGTGTGTGAACATGATAGCCCATCTTTTCAATGCGCCACTTCAAGATTCAGAACCTGCCGTCGGTGTTGGTACGGTTGGGTCATCGGAGGCCATCATGTTGGCTGGCTTGGCTTTCAAAAGAAAGTGGCAGAACAAAAGAAGAGCAGAGGGCAAGCCCATCGACAAACCCAATATTGTCACTGGTGCTAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTAATGGATCCTGAAAAGGCAGTGGAAATGGTGGATGAGAAAACCATCTGTGTCGCTGCTATCCTTGGTTCCACCCTCAATGGAGAATTCGAAGATGTCAAACGGTTAAATGATCTACTCATTGAGAAGAATAATGAAACTGGATGGGATACTCCAATTCATGTGGATGCAGCGAGTGGTGGATTTATTGCACCATTTATATATCCAGACCTTGAATGGGACTTTCGCTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAGTATGGGCTTGTGTATGCTGGCATCGGTTGGGTCATCTGGAGAAGTTCTAGCCAAGTCATTGCTCAGTATTACCAGCTTATTCGCTTGGGCTATGAGGGATATAGGAATGTGATGGAGAATTGCAGGGACAACATGATTGTGCTGAAAGAGGGGTTGGAGAAAACCGGGCGCTTTAGCATCATATCAAAAGATGAAGGAGTGCCATTGGTGGCCTTCACCTTGAAGGATAGAAGCCACTTCAACGAATTCCAGATCTCTGATTTCTTGAAGCGCTACGGCTGGATCGTGCCGGCCTACACTATGCCTCCAGATGCTCAGAGCGTCACTGTCCTCCGTGTCGTCATCAGAGAGGACTTCTCTCGAACATTTGCCGAGCGTCTCGTCATTGATATCCAGAAAGTCTTGCACGAGCTCGATTTGCTTCCAGGCCGGCCCATCGAGAGCACCACCGTCAGCGTCACGGCGGAGACGGCAGAAAACGGCAATCTCGTCCCCAAGAAGAGCGAACTCGAGACCCAAAGGGAAATCACTATGGCCTGGAGGAAGTTCGTGTCCGACAGGAAGAAGATGAACGAGAAGATGAACGGCGTTTGTTAA 1146 0.4852 MLQNRCVNMIAHLFNAPLQDSEPAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDEKTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKTGRFSIISKDEGVPLVAFTLKDRSHFNEFQISDFLKRYGWIVPAYTMPPDAQSVTVLRVVIREDFSRTFAERLVIDIQKVLHELDLLPGRPIESTTVSVTAETAENGNLVPKKSELETQREITMAWRKFVSDRKKMNEKMNGVC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1102 381 PANTHER GLUTAMATE DECARBOXYLASE 2 200 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele01g1102 381 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 201 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele01g1102 381 Gene3D - 1 237 IPR015421 GO:0003824
Lele01g1102 381 Gene3D - 238 325 - -
Lele01g1102 381 FunFam Glutamate decarboxylase 238 325 - -
Lele01g1102 381 SUPERFAMILY PLP-dependent transferases 2 321 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1102 Lele-ChrLele01 6471015 6472569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1102 2 381 Calmodulin-binding Proteins AT5G17330 73.723 0.0 621
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1328 25 9083100 9083915 Lele01g1102 01 6471015 6472569 CCT
Lele01g1102 01 6471015 6472569 Lele03g1104 03 6447188 6449111 hybridization
Lele01g1102 01 6471015 6472569 Lele04g1120 04 7065985 7067950 hybridization