Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1098 ATGGCTATTCAGGATCATAATGAAGTTTCTAGATGCAATGGTCTTCCACTAGAAACTGCAGTATCTCTGAGTTCTGGCCTACTTTCTGCTTCACGTTTGCAACTAAACGATCAGATTTCTACTGGGAAAGACCGTGCTCCAAAGGTAAGGAAACCATACACCATAACGAAACAGAGGGAGCGATGGACTGATGAAGAGCATAAGAAATTCATTGAAGCTCTGAAACTCCATGGCAGGGCATGGCGAAAGATTGAAGAACATATTGGCACAAAGACTGCAGTTCAGATTCGAAGCCATGCTCAGAAGTATTTCACAAAGGTTCTTCGCGAGTCTACTGGGATCTGCATAAGCTCAGAGGATTCCATCGAAATCCCACCTCCACGACCAAAGCGAAAGCCTTCTCATCCTTATCCTCGTAAGCTGGTCGAGTTCCCTGATAAAGAAATCTCCAACGCAGACCGTACAATGAGGTCTAATTCTCTCAAGTCATCAGAATCTGATAAAGAAAACCAGTCTCCAAAATCAGTGTTATCTACTCTTGGTTTAGAAACTCTCGGATGCTCTGATTCATATAAACCAGATGGAAGTCTGTTTGAGGAAGATGGTTCTGCCTCAAATGATCTACAAACTCCTCTGAAATTTGAGCTCTCCCCTAAAGAGAGTGTTTCCACCAAAGAAGAACCTTGTGGTCGGGTTGTTAAGCTTTTTGGGACGAATCTTCTGGTAAAAGATAGTTGTCCAACAAAGAAGAATTCTTTAGATATAGCAGAAACTCCTGCTGCTGGTTTTGCTCCTTGGAGAACTCTTTCCCACAATGGGGAAGTTGAAGATGATAAAGTTGAAAAGGAAGTATCTTGGTGTGGTTCAAACATTACTAGCTCAATAAATGATGGGGACAATAATGATGAAAACCCAGATGTTGAAGCCAGATCAAGTCACATGCATTGCTACAGAAAGGGTTCAGAAAAATTGAGTATTTTTGGCTATTACATGACAACACCCACAGAACCTTCAACCATATCTGAATTATTGGAGAGGCCTAAAGGGTTTGTGCCATATAAGAGATTCATGGCAGAGAGAGAGAATCGGCCCTTAGGTCTAAGTAGGTTTTCAGAAAAGGAGGTGCTTATAATTAAGATGTCAAAGGCAGCTGTTCTTCTGGATTTTTGGGCAAGTCCATTTTGCCTGAGAGCAAGAATCGCTCTGGAGGAAAAGGGTGCGGCTTATGAGAGCAGGGAAGAGGACTTGCTTGGAGGAAAGAGTGAGCTTCTGCTCAAATCTAATCCCATCCATAAGAAAGTCCCTGTGTTGCTGCACAATGGTCAGCCTGTGACAGAGTCTGCAAACATTGTTGCCTACGTTGATGAGGCATGGCCTTCCAAACCTCTGCTTCCAACCACCCCATACGAGCGTGCACAAGCTCGTTTCTGGGCTGACTACATTGACAAAACGGTATTTGAAACTGGAAAGGGAATCTGGTTAAGCAAGGGAGAAGAAGATAAAGAAGCGGCCGTGAAGAACTTCATTGAAGTAGTCAAGAACTTGGAAGGGGCTCTAGGTGACAAAGATTTCTTTGGTGGTGGTGCATTTGGCTATGTGGACATCGTAGCACTGGGTCCAGCCTCATGGTTTTCTGCGTACGAGAAGATTGGGGGATTCAAACTGGAAGACCATTGCCCCAAATTCTCATCATGGATGAAGAAATGCCTGCAGAGGCCATCTGTTGCCAAAACCTATCCAGACCCAGAAAAAGTTCACCAGCTTGTCCTCAAATTAGCCGAGATCTTTGGTTAA 1794 0.4381 MAIQDHNEVSRCNGLPLETAVSLSSGLLSASRLQLNDQISTGKDRAPKVRKPYTITKQRERWTDEEHKKFIEALKLHGRAWRKIEEHIGTKTAVQIRSHAQKYFTKVLRESTGICISSEDSIEIPPPRPKRKPSHPYPRKLVEFPDKEISNADRTMRSNSLKSSESDKENQSPKSVLSTLGLETLGCSDSYKPDGSLFEEDGSASNDLQTPLKFELSPKESVSTKEEPCGRVVKLFGTNLLVKDSCPTKKNSLDIAETPAAGFAPWRTLSHNGEVEDDKVEKEVSWCGSNITSSINDGDNNDENPDVEARSSHMHCYRKGSEKLSIFGYYMTTPTEPSTISELLERPKGFVPYKRFMAERENRPLGLSRFSEKEVLIIKMSKAAVLLDFWASPFCLRARIALEEKGAAYESREEDLLGGKSELLLKSNPIHKKVPVLLHNGQPVTESANIVAYVDEAWPSKPLLPTTPYERAQARFWADYIDKTVFETGKGIWLSKGEEDKEAAVKNFIEVVKNLEGALGDKDFFGGGAFGYVDIVALGPASWFSAYEKIGGFKLEDHCPKFSSWMKKCLQRPSVAKTYPDPEKVHQLVLKLAEIFG 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1098 597 MobiDBLite consensus disorder prediction 119 176 - -
Lele01g1098 597 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Lele01g1098 597 SUPERFAMILY GST C-terminal domain-like 456 594 IPR036282 -
Lele01g1098 597 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Lele01g1098 597 Pfam Glutathione S-transferase, N-terminal domain 386 456 IPR004045 -
Lele01g1098 597 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 467 592 IPR010987 -
Lele01g1098 597 SUPERFAMILY Thioredoxin-like 385 485 IPR036249 -
Lele01g1098 597 SMART sant 58 106 IPR001005 -
Lele01g1098 597 Pfam Myb-like DNA-binding domain 59 104 IPR001005 -
Lele01g1098 597 CDD SANT 61 104 IPR001005 -
Lele01g1098 597 SUPERFAMILY Homeodomain-like 53 106 IPR009057 -
Lele01g1098 597 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Lele01g1098 597 Pfam Glutathione S-transferase, C-terminal domain 495 573 IPR004046 -
Lele01g1098 597 Gene3D Glutaredoxin 378 466 - -
Lele01g1098 597 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Lele01g1098 597 FunFam Tau class glutathione S-transferase 379 466 - -
Lele01g1098 597 Gene3D - 467 597 - -
Lele01g1098 597 SFLD Glutathione Transferase (cytosolic) 381 593 IPR040079 -
Lele01g1098 597 SFLD Main.3: Omega- and Tau-like 381 593 IPR045073 -
Lele01g1098 597 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 382 462 IPR004045 -
Lele01g1098 597 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Lele01g1098 597 MobiDBLite consensus disorder prediction 124 153 - -
Lele01g1098 597 CDD GST_N_Tau 385 458 - -
Lele01g1098 597 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 387 586 IPR045073 -
Lele01g1098 597 CDD GST_C_Tau 468 592 IPR045074 GO:0004364|GO:0006749
Lele01g1098 597 Gene3D - 61 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1098 Lele-ChrLele01 6437405 6441755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1098 380 596 Glutathione S-transferase Gene Family AT1G78380 56.422 2.43e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele01g1098 GST_C 8.1e-08 CL0497