Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1094 ATGTCACCTGTTTCACTGCCTCCTGGCTTCAGGTTCCACCCTACAGATGAAGAGCTGGTTGCTTATTATCTCAAAAGAAAGATCAACGGCCACGAGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGCGAGCCCTGGGACTTGCCTGCTGCTTCTTCTGGCATTCAGGATGCTTATGCACTCTGTCGTGTGATCAAGAAGACTGCAGTTATAACTATGAAAATCACAGATCATTACGTGAATGGAAATCAGATTATGAATACGAGTGATCAGTCATCGAGCATGGAACTCTACTCTGAAGGAAGATCAGGAGAAGATTTAGATCAGAGCTCAGATTATTTGATGCCTATGGATCCTAATAGCTCACCCCATAATATTGGAAATCCCCTTTCAGGACCAAGAGATAACCATGGCAAATGGTCAGAGACTCAGTTCTTATCTGAAAATCCATTCTCTCTTCCAAATTCTTCTTCATTATTTTCCAACTGTGGTTCCATACCTTACCCTCCATCCAAGGTGGATATTGCACTAGAATGTGCCAGGATGCAGCATAGGTTTGCTCCAATGGAGGACTTTCCTTCTGAACTGAAGATGCAAGCACAATATGGTGGTGGGGCCAAAAATGAAGCTGATGAGTTATTACAGGAGATTCTTTCAGTTGCTCATGCTTCTCAGCAACTCATAAACCAGTCTTCTAATAACTATTCTTCTCACTCATGGGGTGGTACTACTAGTACTGCAAACCACCAGCATTATGCTCCTTCTGAACAAGAACATGATTTCACTTTTATGGTTGGCAGAGATAGCACTAATGCTAATGATTATAACTATTATAATAGCAATGCCTGCTGGGAAGATCCAGTAAACACTTCAAGGTCGATAGAGATTGGAGATCTGGATGGTAATTTCAAAGCAGAGAGGATCGTTGAGAATTTAAGATGGGTTGGCATATCAAGCAAGGATTTGGAAATTAAGAGCTATATGGAAGATCAGAAAATTGTCCCAACGGAGGATATTTCTAGTTTCCGAGCAAACAGGGAGGGGAATGAACTGCTGCAAGCAGAATGTGATAATCAGCAAGAAAATAGCAGCAAGGAACTGAATGACACAGACATAAACGACATCTCATTAGGGTTCATCAACGAGGATGACACTAATGAGAACTTGATAGATGAACAGGGCGATGATTATTCGAGTTCTCCGAGTTTTGAGGTGGTTGAAGAAGTCAAAGTGATCAGCCATGGAATGTTTGTGTCCACAAGACAAGTAGCTGACACATTCTTTCACCAAATAGTTCCTTCACAAACCTTCAAGGTTCAACTGAACCCAGTGATAATGGCGCACAATTATCACACGTCGGTGGAGAACATAGAAACGTCAGTTTCTTTCTTCAGAAACTTGAAGGCCTATTCTGATGAGAGAAGTTGGAGTTATGGTGCTGATAATAATTGCGACAATAAGAGCATGAAGAGAATGAGAGAATATGAAGATGATGATGAGAAGGAAAAAGTTTGATATGAGGAGGAGGAGGAGGAGGAGGAGGAAGTCGACGGCTATCTAGGACGGCGAGATGCAGAGAAGCTCGAGTACTCAGGCACAAACGGCGACGGAAGGCGAGATAAAGGGAGGAGAGAACGAAGGGGCGACGAAGGGCAAGATGAAGAAGGTAGAGAAAGAGGAGGGCTACTGGAGTTGGAGGCAGCTGTGGCAGACTAG 1725 0.4307 MSPVSLPPGFRFHPTDEELVAYYLKRKINGHEIELEIIPEVDLYKCEPWDLPAASSGIQDAYALCRVIKKTAVITMKITDHYVNGNQIMNTSDQSSSMELYSEGRSGEDLDQSSDYLMPMDPNSSPHNIGNPLSGPRDNHGKWSETQFLSENPFSLPNSSSLFSNCGSIPYPPSKVDIALECARMQHRFAPMEDFPSELKMQAQYGGGAKNEADELLQEILSVAHASQQLINQSSNNYSSHSWGGTTSTANHQHYAPSEQEHDFTFMVGRDSTNANDYNYYNSNACWEDPVNTSRSIEIGDLDGNFKAERIVENLRWVGISSKDLEIKSYMEDQKIVPTEDISSFRANREGNELLQAECDNQQENSSKELNDTDINDISLGFINEDDTNENLIDEQGDDYSSSPSFEVVEEVKVISHGMFVSTRQVADTFFHQIVPSQTFKVQLNPVIMAHNYHTSVENIETSVSFFRNLKAYSDERSWSYGADNNCDNKSMKRMREYEDDDEKEKVXYEEEEEEEEEVDGYLGRRDAEKLEYSGTNGDGRRDKGRRERRGDEGQDEEGRERGGLLELEAAVAD 574
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1094 574 MobiDBLite consensus disorder prediction 235 255 - -
Lele01g1094 574 Coils Coil 509 519 - -
Lele01g1094 574 Coils Coil 495 507 - -
Lele01g1094 574 Gene3D NAC domain 15 91 IPR036093 GO:0003677|GO:0006355
Lele01g1094 574 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 66 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 521 567 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 504 520 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 489 503 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 103 144 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 117 132 - -
Lele01g1094 574 SUPERFAMILY NAC domain 4 58 IPR036093 GO:0003677|GO:0006355
Lele01g1094 574 ProSiteProfiles NAC domain profile. 6 171 IPR003441 GO:0003677|GO:0006355
Lele01g1094 574 Pfam No apical meristem (NAM) protein 7 69 IPR003441 GO:0003677|GO:0006355
Lele01g1094 574 MobiDBLite consensus disorder prediction 481 574 - -
Lele01g1094 574 MobiDBLite consensus disorder prediction 235 262 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele01g1094 Lele-ChrLele01 6411518 6416481 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1094 1 55 NAC Transcription Factor Family AT1G65910 85.455 1.22e-26 112
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele01g1094 NAM 7.9e-16 No_clan