Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1091 ATGGAAGAAGAAGAAGAACGAAGCCTATTGAGTTTCCTAAGATGGGCAGGAGAGCTTGGAATATCAGACGCGGCAATCACCAATCTACCTCAAGATTCTCTTTCCTGTCTGGGTTATTCTCTCTGCGTCTCCCATTTTCCTCATTCTGGCGGTAGAGGTTTGGGTGCTGTGCGAGATCTTAGGAGTGGAGAATTGATCCTCAGAGTTCCAAAATCTGCCTTAATGACATCAGAGAATGTCATGCAAGATAAGAAGCTCTCCGTTGCTGTTAATAACCACCCTCATCTCTCATCCGCCCAGATATTGATCGTTTGCTTATTATATGAAATGGGCAAAGGAAAATCTTCAAAGTGGCATCCTTACCTCATGCATTTGCCGCATACTTATGACATACTAGCTACATTCGGTGAATTTGAGAAACAAACTCTTCAAGTGGATGAGGCTCGGTGGGTCACAGAAAAGGCTGTATTAAAGGCCAATTCAGAGTGGAAAGAAGCCAATGCTTTGATGGAAGAAATCAAACTCAAGTCCCAACTTTTAACGTTCAAGGCATGGCTTTGGGCTACTGCAACGATATCCTCGCGGACATTGCACATTCCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTATTTAATTATGATGCACCTGGAAGGGAGCCATGTGATCCTGAAGATGAGGAGAATCTATCAGCCAACTCTTCCTTCCAAGTCACTTCTGTCTCGAATGTAGAGGAGCTTGATTCTCATTCCCAGAGATTAACAGATGGTGGGTTTGAGGAAGACGTTAATTCATATTGCTTTTATGCTAGAGAAAATTACAAGCAAGGAGAGCAGGTTTTATTATGCTATGGACTGTACACAAATATAGAGCTTCTTGAACACTATGGTTTCCTCCTACAAGAAAATCCAAACGACAAAATTTTTATCCCTCTTGAATCTGCTGTATATACCTCCAGTTCATGGCCTAAAGAGTCGCTCTATATTTGCTACGACGGGAAGCCTTCCTTTACATTACTGTCTGCATTGAGGTTGTGGGCAACCCCTAAAAATAAGCGCAAGTCTGTCGGGCATCTTGTGTATTCTGGTTCTCAGTTGTCTGTGGACAATGAAATTGTTGTTATGAAATGGCTTTCAAAGACTTGCGATTCTGCATTGAAGAGTTTGCCGACATCAATGGATGAAGACACAATACTACTGAATGCAATGGATAATAGTCAAGATTTTTGTAATTTCACGGAAATCACCAAACTTTTGTCATGTAGGGATGAGATTTGTGGCTTTATGGAAGTTAACAATCTGCAGGATGGCCATGGTTTAAGTGATAAAATTGTATCCAGAAAAGCTAGAAGGTCCATGGACAAGTGGAAATTGGCTGTTAAATGGCGGCTTAGGTATAAAAAAGTGCTCGTGAATTGTATCTCTTATTGCAATGAAATACTTGAGTCTCTCTTGACATAA 1467 0.4151 MEEEEERSLLSFLRWAGELGISDAAITNLPQDSLSCLGYSLCVSHFPHSGGRGLGAVRDLRSGELILRVPKSALMTSENVMQDKKLSVAVNNHPHLSSAQILIVCLLYEMGKGKSSKWHPYLMHLPHTYDILATFGEFEKQTLQVDEARWVTEKAVLKANSEWKEANALMEEIKLKSQLLTFKAWLWATATISSRTLHIPWDEAGCLCPVGDLFNYDAPGREPCDPEDEENLSANSSFQVTSVSNVEELDSHSQRLTDGGFEEDVNSYCFYARENYKQGEQVLLCYGLYTNIELLEHYGFLLQENPNDKIFIPLESAVYTSSSWPKESLYICYDGKPSFTLLSALRLWATPKNKRKSVGHLVYSGSQLSVDNEIVVMKWLSKTCDSALKSLPTSMDEDTILLNAMDNSQDFCNFTEITKLLSCRDEICGFMEVNNLQDGHGLSDKIVSRKARRSMDKWKLAVKWRLRYKKVLVNCISYCNEILESLLT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1091 488 Gene3D - 301 487 IPR036464 -
Lele01g1091 488 SUPERFAMILY SET domain 43 305 IPR046341 -
Lele01g1091 488 CDD SET_LSMT 40 301 - -
Lele01g1091 488 ProSiteProfiles SET domain profile. 39 287 IPR001214 GO:0005515
Lele01g1091 488 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 297 408 IPR036464 -
Lele01g1091 488 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 8 416 - -
Lele01g1091 488 FunFam Protein SET DOMAIN GROUP 40 9 301 - -
Lele01g1091 488 Pfam SET domain 51 287 IPR001214 GO:0005515
Lele01g1091 488 Gene3D set domain protein methyltransferase, domain 1 8 300 - -
Lele01g1091 488 Pfam Rubisco LSMT substrate-binding 338 472 IPR015353 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1091 Lele-ChrLele01 6394754 6397237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1091 7 315 NAC Transcription Factor Family AT3G56570 22.500 2.21e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele01g1091 SET 2e-11 No_clan