Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1080 ATGACACTAAAGGATGGTGGCACATGCCTGCTGTCACATCAGTCTGTAATGTACAATCCAGATTTTCCAGTACGGATGATCCAATGGCTAAGATTGGCTCTTGCCATTACTCTTACAGAGACGCTCCCTCCCTCTCTCTCTACTGCCACAGGTCCAGCTTTGCTCGATTCTGTATCTTTAAAAGAAAGGAAAAGAAAAGTGAAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGAGGAGGCGAGAAGAAATGTCTGAATTCCGAGCTATGGCATGCATGCGCGGGTCCTCTCGTGTCCCTACCAAATGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCACAGCGAACAGGTTGCAGCCACAACTAACAGAGAACTTGATGGGCACATACCCAACTACCCAAGCTTGCCGCCCCAGTTAATTTGCCAACTTCATAATGTCACAATGCATGCTGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTGCAGCCATTGACTCCGCAAGAGCAGAAGGAAACATTTCTTCCTCTGGAATTGGGCATTCCGAGTAAACAGCCCTCGAATTATTTTTGCAAGACATTAACAGCAAGTGACACCAGCACACATGGAGGATTTTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCGCACTGCAGCCACCGGCACAAGAACTAATTGCTAGGGACCTCCATGACGTTGAGTGGAAGTTCAGACATATTTTTCGTGGACAGCCGAAACGACACCTTCTTACAACAGGCTGGAGTGTATTTGTAAGTGCCAAGAGACTTGTGGCCGGAGATTCTGTGCTATTTATATGGAATGAAAAGAATCAGCTACTTTTAGGAATACGTCGTGCCAGTCGGCCCCAAACTGTGATGCCATCGTCTGTTCTTTCGACTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACCACTTTCAAAATATGTCAAGGCTGTGTACCATACACGTGTTTCAGTTGGCATGCGATTCAGGATGCTTTTTGAGACTGAGGAATCAAGTGTACGCAGGTACATGGGTACCATAACTGGCATAAGTGATCTGGATCCCGTTCGTTGGCCAAATTCTCATTGGCGGTCTGTCAAGGTTGGTTGGGATGAATCGACAGCAGGAGATAGGCAGCCACGGGTATCATTATGGGAAATTGAGCCTTTGACAACATTCCCAATGTATCCATCACTATTCCCCCTCAGATTGAAGCGGCCATGGCATCCTGGCTCTTCATCTTTGCACGATGGAAGAGATGATGCAGGGCTGATGTGGCTGAGAGGTGGACCTGGAGATCAAGGTCTCAACTCCCTCAATTTTCAAGGCGGTGGTTTGTTGCCATGGATGCAACCGAGACTAGATCCGACTTTGCTAGGAAATGGCCATAATCAACAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACCTAGGGAGTGGAGATCTCTTGCGTCAACAAATGATGCATTTGCAACAACCCTTGCATTATCTTCAACAACCGGGAAACCATAATTCTCTGCAGCTTCAGCAGCATCAAGCAATTCAGCAAATAAGTTCTAATATCCTTCAGCCACAAGCTGTGGCAGAGAACTTATCTCAGCACCTCCTTCAGAAACCGCATAACAATCAAGAAGACCAAGCGCAGCAGCAGCAACCACAGAATAATTATAACGATGCATTTTTTATTCAGGGCGATCAGCTCCCACAGAGGCAACACTCCCATGCTCCTTCGCCGTCATATTCAAAACCTGATTTCTTTGATTCGAGCATAAAGTTCTCATCGGTTTCCCCTGGACAGAACATGCTCAGTTCACTTTGTCCTGAAGGGAGTAGCAATCTTTTCAGCCTACTGAGAAGCAGTCAGTCTACACTGACCGAACAATTAGCCCAACAATCATGGAGTCCAAAGTATGCGCCTGTGCAGGTGAGTGCTGCCTTTGGCAACTCAATGTCACACTCACAATATACTGAGAAAGATTCTGCGACGGTGCCATCGCATTGTACTTCAGATGCCCAGAATCCTACTCTCTTTGGCGTTAATATTGATTCATCGGGACTTCTGCTTCCGACCACTGTCCCTGGGTATTCAACTTCCTCGGTTGGTACTGATGCATCAACCATGCCATTAGGGGACTCTGGATTCCAGGGTTCTCTTTATAATTGTGTGCAAGATTCTGCAGAGTTGATTCAGAGTTCAGGGCAAGTTGACCCACAAAACCAAACTCAGACATTTGTCAAGGTCTACAAATCAGGTTCGGTTGGGCGCTCACTTGACATCTCTCGGTTCAGCAGCTATCATGAGCTGAGAGAGGAGTTGGCCCAAATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATGTTCTTCTCCTTGGGGACGACCCGTGGGAATCTTTCGTCAACAATGTTTGGTACATCAAGATACTCTCACCTGAGGACATTATGAAGATGGGTGAGCAATCGGTGGAATCGTCACTTGGTCCTAGCGCGGGACAAAGAATGAACAGCAGCACTGCGGATTCTCAGGACCTTTCTGGCTTTCCATCAATGGGCCCGCTTGAATACTGA 2736 0.4697 MTLKDGGTCLLSHQSVMYNPDFPVRMIQWLRLALAITLTETLPPSLSTATGPALLDSVSLKERKRKVKLDMKLSTSGLGQQGQEGGGGEKKCLNSELWHACAGPLVSLPNAGTRVVYFPQGHSEQVAATTNRELDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFALQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSTDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGSSSLHDGRDDAGLMWLRGGPGDQGLNSLNFQGGGLLPWMQPRLDPTLLGNGHNQQYQAMLAAGLQNLGSGDLLRQQMMHLQQPLHYLQQPGNHNSLQLQQHQAIQQISSNILQPQAVAENLSQHLLQKPHNNQEDQAQQQQPQNNYNDAFFIQGDQLPQRQHSHAPSPSYSKPDFFDSSIKFSSVSPGQNMLSSLCPEGSSNLFSLLRSSQSTLTEQLAQQSWSPKYAPVQVSAAFGNSMSHSQYTEKDSATVPSHCTSDAQNPTLFGVNIDSSGLLLPTTVPGYSTSSVGTDASTMPLGDSGFQGSLYNCVQDSAELIQSSGQVDPQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIMKMGEQSVESSLGPSAGQRMNSSTADSQDLSGFPSMGPLEY 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1080 911 SMART B3_2 200 302 IPR003340 GO:0003677
Lele01g1080 911 Gene3D - 781 874 - -
Lele01g1080 911 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 89 874 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele01g1080 911 ProSiteProfiles PB1 domain profile. 785 869 IPR000270 GO:0005515
Lele01g1080 911 Pfam B3 DNA binding domain 200 301 IPR003340 GO:0003677
Lele01g1080 911 Pfam AUX/IAA family 781 871 IPR033389 -
Lele01g1080 911 FunFam Auxin response factor 780 874 - -
Lele01g1080 911 ProSiteProfiles B3 DNA-binding domain profile. 200 302 IPR003340 GO:0003677
Lele01g1080 911 SUPERFAMILY DNA-binding pseudobarrel domain 184 329 IPR015300 -
Lele01g1080 911 FunFam Auxin response factor 198 302 - -
Lele01g1080 911 CDD B3_DNA 199 300 IPR003340 GO:0003677
Lele01g1080 911 Pfam Auxin response factor 326 409 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele01g1080 911 Gene3D - 198 301 IPR015300 -
Lele01g1080 911 SUPERFAMILY CAD & PB1 domains 777 859 - -
Lele01g1080 911 MobiDBLite consensus disorder prediction 875 911 - -
Lele01g1080 911 Gene3D - 364 436 - -
Lele01g1080 911 MobiDBLite consensus disorder prediction 878 901 - -
Lele01g1080 911 FunFam Auxin response factor 364 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1080 Lele-ChrLele01 6313491 6320277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1080 170 876 B3 DNA Binding Superfamily AT5G37020 69.306 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele01g1080 AUX_IAA 5.2e-08 CL0072