Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1072 ATGGCAATGGCATTTTCTTTTGGCTTCCCCTTTGGTTCAATAGCCTCATACGACTATGCTAGTCCAAACAAAGAATTCCATTGGCTGGCATCTGTCCTCACTGGTATCATCTCCTGTGTTATTGTCTATAGATTAACCGCTCTTGTGAGCGCTCTGTTGTTTGAGGGATATGGCAAGTTGAGCAGTGCACAAAAAACTGAATGGAACAACAGGGGGTTCTCAACAGTTCATGCTGTATTTGTATCAATTGCATCTTTCTACCTCCTGCTGGTGTCAGATATCTTCAATAAGGATTTGGATGATGAGCCAGTAATTAGTAGATCGTCTACTTTGTCAAATACTGTATTTGGGATTTCTGTAGGTTATTTTCTATCAGATCTTGCAATGATTCTTTGGCATTTTCCGGCTTTGGGGGGCCTGGAATATGTTCTGCACCATGGACTGTCCATGTTTTCCATCATCCTCTCTCTACTAAGTGGTCAAGCACAGCTCTACATACTAATGGTTCTTTTTACGGAAAGCACTACTCCTTGTGTTAATCTAAGATGGTACTTGGATAATCTTGGTCTTAAGAACTCAAAACTCTACATTGGGAATGGCATTGCATTGTTCCTTGGGTGGTTGTTAGCGAGGATTATTCTGTTCATATTCTTTTTTATCCATCTGTGGATCCATTTCAATGAGGTCAAGACAATCTTTCCTCTCGGCTTCTACAGCTTGCTTGTGGTGCCACCCATGTTGACAATCATGAATATATTCTGGTTCTGGAAGATTGCTAAAGGTTTAGTTAAAACTCTTTCAAAAGCGAAACACAAGAAGTGA 822 0.4051 MAMAFSFGFPFGSIASYDYASPNKEFHWLASVLTGIISCVIVYRLTALVSALLFEGYGKLSSAQKTEWNNRGFSTVHAVFVSIASFYLLLVSDIFNKDLDDEPVISRSSTLSNTVFGISVGYFLSDLAMILWHFPALGGLEYVLHHGLSMFSIILSLLSGQAQLYILMVLFTESTTPCVNLRWYLDNLGLKNSKLYIGNGIALFLGWLLARIILFIFFFIHLWIHFNEVKTIFPLGFYSLLVVPPMLTIMNIFWFWKIAKGLVKTLSKAKHKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1072 273 PANTHER CT120 PROTEIN 30 271 - -
Lele01g1072 273 ProSiteProfiles TLC domain profile. 63 267 IPR006634 GO:0016020
Lele01g1072 273 SMART lag1_27 63 267 IPR006634 GO:0016020
Lele01g1072 273 Pfam TLC domain 67 260 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1072 Lele-ChrLele01 6265419 6268350 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1360 25 9429492 9430924 Lele01g1072 01 6265419 6268350 CCT
Lele26g1367 26 9332148 9338237 Lele01g1072 01 6265419 6268350 CCT
Lele27g0722 27 15375684 15380462 Lele01g1072 01 6265419 6268350 CCT
Lele28g1353 28 9368017 9384497 Lele01g1072 01 6265419 6268350 CCT
Lele01g1072 01 6265419 6268350 Lele01g1072 01 6265419 6268350 ECH
Lele01g1072 01 6265419 6268350 Lele03g1077 03 6258789 6263863 hybridization
Lele01g1072 01 6265419 6268350 Lele04g1086 04 6811529 6814602 hybridization