Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1062 ATGTATCTTTCGAATGTCTGGAATAATGAAGCTGTATTCAGCTTATGGTTCTGTTGCTGGTTGCTTCTGGTTACTGCGCAGGGTTCTGTCACTCACCCCACCGAAGTTGACGTATTGAAATCCATCAAAGGGCGTTTGATTGATCCTAATGGAAATCTGAACAACTGGAATCGTGGAGATCCGTGTACATCTAAATGGAGAGGGGTTAATTGTTCCAATAGGACACTGGCTGATAACTATTTACATGTTAAAGAATTGCGACTACTGAATTTGAACTTGTCTGGAACTTTGGCACCAGAGATTGGAAATTTATCTCATCTGGAAATATTGGACTTTATGTGGAACAATATAAGTGGGAGTATACCAAAGGAAATTGGTAACATCAAAAGTTTGAAACTCTTGCTTCTGAATGGAAACGAATTAAGAGGTCAGCTGCCCGAAGAGCTTGGTTATCTTCCAAATCTGGATAGAATGCAAATTGATCAGAACAATATAACAGGACCTATTCCTACATCGTTTGCAAACCTAAACAAGGCAAAGCACTTTCACATGAACAATAACTCACTTACTGGACCAATCCCTCGAGAGTTTTCACGCTTGTCAAGCCTTATTCACCTCCTTCTTGACCATAACAACTTATCAGGAGATCTTCCACACGAGCTCTCCCAGATACCTCTCATACGCATAATCCAGCTTGATAACAATGATTTTGGGGGGACTACCATTCCAGATTCATATGGCAACATTCCAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACCTGCTAGGACCAATCCCTGATTTTAGCAGGATACCAAACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGAATCGATTCCTTCTAATAAGCTTTCTGAAACAGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCGAACTTTTCTGGTCTCCCAAGGCTTCAACTATTGTCACTTTCAAACAATTCATTGAATGGCAGTGTTCCTTCCACCATTTGGCAGAACAGTACTTCGAATGCAATGCAAGGATTGCTCTTGGATTTTCAAAATAATAATCTTGAAAGCATATCAGGCACTATTGATCTTCCTCCTAACATCACAGTCAGGCTTGAGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCAGCTCTGTGGAGCTGCAAGTGCCAATGACACAAACATCTTGAGACTAACAGACTCCAGTGTTGACTGTCCCCCTCAATCATGCCCTCCTCCTTATGAATATTCCAAAACATCTTCTGTGAAGTGCTTCTGTGCAGCGCCATTGCTCATTGGTTATCGATTAAAAAGTCCTGGATTTTACGATTTTGATCCATTCGAGACAGATTTTGCTAACGTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCTCCCCTGAAAGGCAAGGACTTCGACTGAGAATGTACTTGAAGCTTTTTCCGGAATCCGTTGATAGCCAAAGCCCCCGTACTTTCAACGAAAGCGAGGTTCTGCGTCTTTATGGCATGTTCACAGGATGGGTTGTTTCAGACAATGAATTTTTCGGACCTTATGAACTGCTCAACTTCACTCTTCTGGGTCCTTACAGTGATATTTTGATTGGCCCCACTACAAGTTCAGGGATAAGCAAGGGTGCCCTGGCCGGCATTATCTTAGGGACAATTGCCGGTGCAGTTACGTTATCTGCAATTGTGACTCTTCTTATCCTGAGGTCGCGGATGAGAGATTACCATGCACTTTCATCAAAGCGAAATCTTTCTAGAATATCAATAAAAATTGATGGTGTGCGGAGCTTCACTTATGAAGAAATGGCTTTGGCAACCAACAATTTTAGCGACTCCAGGGAAGCTGGCCAAGGGGGCTATGGGAAAGTTTATAGAGGTATTCTCGCTGACGGCACCGTTGTAGCGATAAAACGTGCGCAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATACAATTACTATCAAGGATACATCATCGCAACCTTGTGACTTTGATTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACGCTAAGGGATAATCTTTCTGCCAATTCGAAAAAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGTATTCTCTATCTACATACGGAAGCTGATCCTCCGATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCCAGGTTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTGCCTGGTCACGTATCTACAGTAGTAAAGGGAACCCCGGGCTACCTTGATCCAGAGTATTTTTTAACTCGTAAATTGACGGACAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTTCTGGAACTTTTGACAGGGAAGCCACCAATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCGTACCAATCTGGTGAGGTATTCTCGGTGATTGATGGACGTATGGGGCCCTATCCTTCAGAGCACCTAGAGAAGTTCTTGAGCCTGGCCCTCAAGTGTAGCCAAGACGAGCCAGATGCACGACCTAAAATGGCACAAGCGGTTCGAGAGCTTGAAAACATGTGGTCCATGATCGAGTCCAATGCCCAGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCGGTTCACCATCTTCGTCCTCTACGAGCCAAACTCCTTTTATATCTTCGTCCTCCTTGAGCAAAACTCCTTTTATATCGGGAGATATGTCTGGTAGCGAACTTGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG 2892 0.4277 MYLSNVWNNEAVFSLWFCCWLLLVTAQGSVTHPTEVDVLKSIKGRLIDPNGNLNNWNRGDPCTSKWRGVNCSNRTLADNYLHVKELRLLNLNLSGTLAPEIGNLSHLEILDFMWNNISGSIPKEIGNIKSLKLLLLNGNELRGQLPEELGYLPNLDRMQIDQNNITGPIPTSFANLNKAKHFHMNNNSLTGPIPREFSRLSSLIHLLLDHNNLSGDLPHELSQIPLIRIIQLDNNDFGGTTIPDSYGNIPTLLKLSLRNCNLLGPIPDFSRIPNLLYLDLSSNQLNESIPSNKLSETVTTIDLSNNKLTGTIPSNFSGLPRLQLLSLSNNSLNGSVPSTIWQNSTSNAMQGLLLDFQNNNLESISGTIDLPPNITVRLEGNPLCSNNTLVQLCGAASANDTNILRLTDSSVDCPPQSCPPPYEYSKTSSVKCFCAAPLLIGYRLKSPGFYDFDPFETDFANVLASNYSLMNNQVDIGSPERQGLRLRMYLKLFPESVDSQSPRTFNESEVLRLYGMFTGWVVSDNEFFGPYELLNFTLLGPYSDILIGPTTSSGISKGALAGIILGTIAGAVTLSAIVTLLILRSRMRDYHALSSKRNLSRISIKIDGVRSFTYEEMALATNNFSDSREAGQGGYGKVYRGILADGTVVAIKRAQVGSLQGEREFLTEIQLLSRIHHRNLVTLIGYCDEGGEQMLVYEFMPNGTLRDNLSANSKKPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRFNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDGRMGPYPSEHLEKFLSLALKCSQDEPDARPKMAQAVRELENMWSMIESNAQIPEYISSDSGKLFGSPSSSSTSQTPFISSSSLSKTPFISGDMSGSELVSGVEPTIRPR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1062 963 Pfam Leucine rich repeat 297 341 IPR001611 GO:0005515
Lele01g1062 963 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Lele01g1062 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Lele01g1062 963 PRINTS Leucine-rich repeat signature 319 332 - -
Lele01g1062 963 PRINTS Leucine-rich repeat signature 298 311 - -
Lele01g1062 963 Gene3D Transferase(Phosphotransferase) domain 1 700 911 - -
Lele01g1062 963 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 908 - -
Lele01g1062 963 FunFam Leucine-rich repeat protein kinase family protein 588 699 - -
Lele01g1062 963 MobiDBLite consensus disorder prediction 917 963 - -
Lele01g1062 963 Gene3D Phosphorylase Kinase; domain 1 595 699 - -
Lele01g1062 963 ProSiteProfiles Leucine-rich repeat profile. 274 295 IPR001611 GO:0005515
Lele01g1062 963 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lele01g1062 963 Gene3D Ribonuclease Inhibitor 194 295 IPR032675 -
Lele01g1062 963 CDD STKc_IRAK 631 896 - -
Lele01g1062 963 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 293 422 - -
Lele01g1062 963 Pfam Protein tyrosine and serine/threonine kinase 628 893 IPR001245 GO:0004672|GO:0006468
Lele01g1062 963 SUPERFAMILY L domain-like 42 393 - -
Lele01g1062 963 SUPERFAMILY Protein kinase-like (PK-like) 609 914 IPR011009 -
Lele01g1062 963 Gene3D Ribonuclease Inhibitor 296 387 IPR032675 -
Lele01g1062 963 SMART serkin_6 624 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1062 963 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1062 963 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Lele01g1062 963 PANTHER RECEPTOR-LIKE PROTEIN 55 41 898 - -
Lele01g1062 963 MobiDBLite consensus disorder prediction 917 947 - -
Lele01g1062 963 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1062 Lele-ChrLele01 6196430 6204369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1062 18 896 Receptor kinase-like Gene Family AT5G01950 59.029 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele01g1062 PK_Tyr_Ser-Thr 2e-45 CL0016