Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1046 ATGGGGTCTGAGGTTTGTGTCGGTGTTTCTGGTGGCTCCGCCACTGCTCATGAATGGAAGAAGGGGTGGCCTCTTCCATATGGTGGATTCGCCCAATTATGTAACAACTGCGGGATTTTGACGGAATGCAAGCTTGACACCCTTGATTCCATGTCTGCCTATGAGACATCCATTTTCTGTAGTAAATTCCACCGCCAAGAAACTGGTTGGAGGGATTGCAGCTTTTGCAAAAAGCCCATCCACAGTGGATGCATAGTATCTAGGTCTTTGTTCGACTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTCGATCGTGTCTGAACACCAAAGAACGAAATGGGGCTGTTACATCTACCACAACAAATGCAAGTGATTGTCATCCTCATCATATTGATGGGAAACTGTTGGTGGATAATGTTGATGAAGGAAAACTTATGCAATTATGCAGAATTGTTGAAGCTAGTGAGACTAATGGTTGGCATCAGCCTCAAAGAGATAAAATGATTTCATCTAGTGGGTTAAAGAGCCAAGATATTAAGTGTTTAACAAGGGATATGAATTCAGGATTTTCAAATATGATTACAACACCTATTCAGTCATTAAAATTTCCTTTATTAGAAAATAATAGACCAACATGGGAGATTAAAAATGTGTATGAGCCACTTGCACAACCATCTTTGAGTATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCTTGCTTCTGCTGGAGAGATTGTAGAAGAAAGGCTTGAGGGCAAACAATCTTCTCTGTTTCATCAAGTGCAAAGATCTCACGCTGTATTTGTTAAACCATCAAAGACTGGTCTTACCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCTCAGGCAGGTGTTGCCCGGCCACCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGATTACTGACGAAGAGCTGGAGCAATTGTCTGGAAATTTTAAATCCACTGTAGTGCCATTGTTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTTCTTCCAAAGGCTTGTGCTGAAGCCTTTTTCCCTCCTATTTCTCAATCAGAGGGTCTTCCTTTGGAAATACGTGATGTGAAGGGGAATGAATGGACGTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCAATGGAATTGGTTGCGGGTGATACTGTGACATTTAGTAGGATAGATCCCGGTGGCAGACTTATTATGGGTTTCAGAAAGACATCAATTTCTCTAGAAACACAGGATGCGTCTACATCTGCACATTCTAATGGGATTACAACAAAGGAAACACCTATTTCTGGTGCAACTGAGAGCCTGCCCTCAGGAAGTAGTTATTCTGATCTTTTTCAGTCTGTGGAAGGGAACAGGGAAACTCACTTAAATAGAAAATCAGAACACCTGCATTTGGGTAGCAGGGTAGCTGATTTTCCTCAAACGGAAAATTATGGCCAGATAACAAAAAATGATTCCCTGCAGCAATCAATTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATCGGGACTAAAAGTAAGAGGTTGCTCATTAATTGTGATGATGCTTTGGAGTTGAGACTAACGTGGGAGGAAGCACAAGACTTACTTCGTCCACCACCCAATGTTCAGCCAATCATTGTTACAATTGAGGACCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCAGAGCCTGCCCATCTGGGGGGCAGGAACAATGGGCTTCATGTGATGATTGCTCCAAATGGCGAAAATTGCCTGTAGATGTTCTTCTACCACATAAGTGGACTTGTTCTAAAAATGTCTGGGATCCAACCAGGTCTTCATGTTCTGCACCGGAGGAGCTAGGACCTAAGGAATTGGAAGATCTTTCGAAATCCAACAAAGACTTTAAAAAGCGAAGATTTACAGAACATGATAAGTCAGTCCAAGAATTAGAACCTTCAGGCCTTGATTCTCTTGCCAATGTGGCAGTGTTGGGAGATGGTTTTGGGGATCCTTCTGAGTCATCAGCTGGACCCACCACCAAACATCCTAGACATCGTCCTGGCTGCACCTGCATTGTCTGCATTCAGCCGCCAAGTGGAAGGGGAAGACATCATCCCACCTGTACTTGCAACGTGTGCATGACTGTGAAAAGGCGGTTCAAAACCCTTATGCTGCGTAAGAAGAAACGCCAATCCGAGCACGAATCAGATGCTAAACCGATGGATCATAGAGAAGAGTCTTCAGTTATGAAGGGATCACCTAGGGAAGACACAAGTCATGTGGAGAAAGAAGGAAGCATAAATAGAAGACAGCTTGAGGTGGGTGAATCCAGTGCTGTGCAGATAGATCTGAACAGTCATCCTGATCGCGACGACATGCAAGTGGATGCACCAAGCATGAATGGTCATGTTGGAGCTCCAAACTATCCACCACAGGTATATATGGATCAACATGGCCCTAACCCTAATGGGGTTCGGGGATACTTCTCTAATGGGGGAAGCTTCGGATCAGTTATCTGGGAGAAGGAAAGAACAGACAAGGTATACCATGATCCCAATTCAAGCCAGAACAATCCTCCTTGA 2685 0.4384 MGSEVCVGVSGGSATAHEWKKGWPLPYGGFAQLCNNCGILTECKLDTLDSMSAYETSIFCSKFHRQETGWRDCSFCKKPIHSGCIVSRSLFDYLDFGGIGCISCIKASRSCLNTKERNGAVTSTTTNASDCHPHHIDGKLLVDNVDEGKLMQLCRIVEASETNGWHQPQRDKMISSSGLKSQDIKCLTRDMNSGFSNMITTPIQSLKFPLLENNRPTWEIKNVYEPLAQPSLSMSLGIPSGNSALASAGEIVEERLEGKQSSLFHQVQRSHAVFVKPSKTGLTMNIETNKGMNSISQAGVARPPVEGRGKSQLLPRYWPRITDEELEQLSGNFKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPISQSEGLPLEIRDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMELVAGDTVTFSRIDPGGRLIMGFRKTSISLETQDASTSAHSNGITTKETPISGATESLPSGSSYSDLFQSVEGNRETHLNRKSEHLHLGSRVADFPQTENYGQITKNDSLQQSISVSEKKRTRNIGTKSKRLLINCDDALELRLTWEEAQDLLRPPPNVQPIIVTIEDHIFEEYNEPPVFGKRTIFRACPSGGQEQWASCDDCSKWRKLPVDVLLPHKWTCSKNVWDPTRSSCSAPEELGPKELEDLSKSNKDFKKRRFTEHDKSVQELEPSGLDSLANVAVLGDGFGDPSESSAGPTTKHPRHRPGCTCIVCIQPPSGRGRHHPTCTCNVCMTVKRRFKTLMLRKKKRQSEHESDAKPMDHREESSVMKGSPREDTSHVEKEGSINRRQLEVGESSAVQIDLNSHPDRDDMQVDAPSMNGHVGAPNYPPQVYMDQHGPNPNGVRGYFSNGGSFGSVIWEKERTDKVYHDPNSSQNNPP 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1046 894 MobiDBLite consensus disorder prediction 762 804 - -
Lele01g1046 894 MobiDBLite consensus disorder prediction 449 482 - -
Lele01g1046 894 MobiDBLite consensus disorder prediction 696 722 - -
Lele01g1046 894 ProSiteProfiles B3 DNA-binding domain profile. 341 442 IPR003340 GO:0003677
Lele01g1046 894 SUPERFAMILY DNA-binding pseudobarrel domain 338 442 IPR015300 -
Lele01g1046 894 Gene3D - 609 663 - -
Lele01g1046 894 CDD B3_DNA 339 440 IPR003340 GO:0003677
Lele01g1046 894 Pfam CW-type Zinc Finger 611 653 IPR011124 GO:0008270
Lele01g1046 894 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 5 852 - -
Lele01g1046 894 Pfam B3 DNA binding domain 341 440 IPR003340 GO:0003677
Lele01g1046 894 MobiDBLite consensus disorder prediction 643 662 - -
Lele01g1046 894 FunFam B3 domain-containing transcription repressor VAL1 319 446 - -
Lele01g1046 894 Gene3D - 319 443 IPR015300 -
Lele01g1046 894 SMART B3_2 341 441 IPR003340 GO:0003677
Lele01g1046 894 MobiDBLite consensus disorder prediction 759 810 - -
Lele01g1046 894 ProSiteProfiles Zinc finger CW-type profile. 606 656 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1046 Lele-ChrLele01 6058514 6064348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1046 1 831 B3 DNA Binding Superfamily AT2G30470 45.923 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele01g1046 B3 1.4e-14 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1046 01 6058514 6064348 Lele01g1046 01 6058514 6064348 ECH
Lele01g1046 01 6058514 6064348 Lele03g1051 03 6076719 6082514 hybridization
Lele01g1046 01 6058514 6064348 Lele04g1060 04 6601031 6608322 hybridization