Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1044 ATGGAGGTTGTTTTGGCAGCATCTTCTGTTGATGCTGATATTGGCTGCTGGGACCTTCAGTCAGGGGCTGAGCAACTGCGCTATAAAACTTGCGCTACCCCACCTCATGGCCTCATTAGTGTGGGCAGTCACTTCCTTGCATCTTCCCAGATCCGAGATTCATCAGCTAATGCTGGTCTGGTTTTCTACTGGTCCTGGTCCAAGCCTCAAGTAGAGGTCAAGAGCTTTCCAGCTGAACCAATCAGGCCTCTTGCTGCTAATCACCCGGGCACTTATATAGCTGGGGGTGGTTTATCGGGTGACATATACTTTTGGGAGGTTGAAACTGGCAGATTGCTTAAGAAGTGGCATGCTCATTATAGGGCTGTAACTTGCCTAGTATTTTCTGAGGATGACTCACTACTGATATCTGGTTCAGAAGATGGATGCATACGAGTTTGGTCCTTGTTCATGATATTTGATGATTTGAAAAGGCGGGCAGCAGGTCATCTTTATGAGCATAGTTTTTCAGAGCACACCTTACCAGTAACTGACATTGTAATCGGTTATGGAGGATGCAATGCAATTATAATTTCTGCTTCAGAGGATAGGACCTGTAAGGTCTGGAGCTTATCTAGAGGAACACTACTAAGAAATATAGTATTCCCTTCAATAATTGATGCAATTGCATTGGATCCTGCTGAACCTGTCTTTTATGCTGGCAGTAGAGATGGAAAAATATTTATTGCCGCTCTTAACACTGAAAGGATCTTTAATCATAGTCATGAGATGCATATCATCGGTTCATTCCCTAATCACAGCAAAGCAGTTACTTGCTTAACATATAGTGCAAGTGAGAATTTGTTAATTTCTGGATCAGAAGATGGAATGGTTCGGGTTTGGAATCCAAAAACTCACAATTTTGTCCGCATGTTCAAACATGCAAAAGGGCCTGTAAATAATATTCTTGTTGTTAGAAAACAGCTTGACTCAAGTAAGCGTATGTCTTCAACTTTGCAATCGTCCTCAAGAAGGCAGGGATCTTTATTACCCCCTCCATTGGAAAAATACTCAAATTCAACAGCAGATGAAGAAGATTCAGATGTTAAGACCTTTGTTAGCCTCCCCTATGGCAGGAGCGGCATGGAAGTTTCATACATGTCTTCTCAGGCGATATTTAATCAAATCAAGGAATTTCAGAATCAGGGCTCCTCTGCTTCTGAAATGGAGATGGAAAGGCTAAAAGCAGATTGCAAGAGGTCTGTCCAGATGGTTGACCGATATAAGAAAATGTATGAAGATTTGCAAGAGCTCTATGAAGAAGACTTCTTGAAAAGCGGTCAGACAAAAATTTCTGATGAAACTGTTCTTGAAGAAATAAGACTATGTTTTTGCATCAAGGCTTCTCAGCATGGCGACTCATCTCCTCTCACGTGTCTATTTGACGGTGGCCATCGTGCCATACGCAGAGCAATGGAAGAAGATGATAGTCAAGGACTTGCTTTCTCCGGCGAAGCACCGTGGCTCCATGACAAAAGAATGGAGGAAGCTGATAAACTCGTGCGCTACGTCTATAGGAGTCTGAATAACAATGAAGGACGTCTAGTGAATGTGAGGATTGCTGCCCAGCATTTCTGTGGGAATGCCATAAGGAAAATGATCTTCAATAAAAGTAACATCCAATAGGGACTCAACTTGGATGGGCATGAGAGAATGTCGAAGGATGCTATGAGGACAGTGAACAAGTATCATGATCCCATAATTGAAGCAATATTCAAACAGTGGAACGATGGCACCAAGACTAAAACTGATGACTTGCTTGATGTCATGATTTCTCTCAAGGATAAGGATGATGATAATAAACCCCTATTGGCCATGCAGGAAATCAAGGCTCAAATTCCAGTTAATGCTCTTGTCTAG 1899 0.4234 MEVVLAASSVDADIGCWDLQSGAEQLRYKTCATPPHGLISVGSHFLASSQIRDSSANAGLVFYWSWSKPQVEVKSFPAEPIRPLAANHPGTYIAGGGLSGDIYFWEVETGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCIRVWSLFMIFDDLKRRAAGHLYEHSFSEHTLPVTDIVIGYGGCNAIIISASEDRTCKVWSLSRGTLLRNIVFPSIIDAIALDPAEPVFYAGSRDGKIFIAALNTERIFNHSHEMHIIGSFPNHSKAVTCLTYSASENLLISGSEDGMVRVWNPKTHNFVRMFKHAKGPVNNILVVRKQLDSSKRMSSTLQSSSRRQGSLLPPPLEKYSNSTADEEDSDVKTFVSLPYGRSGMEVSYMSSQAIFNQIKEFQNQGSSASEMEMERLKADCKRSVQMVDRYKKMYEDLQELYEEDFLKSGQTKISDETVLEEIRLCFCIKASQHGDSSPLTCLFDGGHRAIRRAMEEDDSQGLAFSGEAPWLHDKRMEEADKLVRYVYRSLNNNEGRLVNVRIAAQHFCGNAIRKMIFNKSNIQXGLNLDGHERMSKDAMRTVNKYHDPIIEAIFKQWNDGTKTKTDDLLDVMISLKDKDDDNKPLLAMQEIKAQIPVNALV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1044 632 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 295 - -
Lele01g1044 632 SUPERFAMILY Cytochrome P450 502 626 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele01g1044 632 MobiDBLite consensus disorder prediction 327 356 - -
Lele01g1044 632 Pfam WD domain, G-beta repeat 260 295 IPR001680 GO:0005515
Lele01g1044 632 Pfam WD domain, G-beta repeat 111 148 IPR001680 GO:0005515
Lele01g1044 632 Pfam WD domain, G-beta repeat 167 203 IPR001680 GO:0005515
Lele01g1044 632 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 116 149 - -
Lele01g1044 632 ProSiteProfiles Trp-Asp (WD) repeats profile. 169 212 IPR001680 GO:0005515
Lele01g1044 632 MobiDBLite consensus disorder prediction 327 341 - -
Lele01g1044 632 PANTHER WD-REPEAT PROTEIN 18 2 433 IPR045227 -
Lele01g1044 632 PRINTS G protein beta WD-40 repeat signature 190 204 IPR020472 -
Lele01g1044 632 PRINTS G protein beta WD-40 repeat signature 135 149 IPR020472 -
Lele01g1044 632 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Lele01g1044 632 Gene3D - 215 338 IPR015943 GO:0005515
Lele01g1044 632 ProSiteProfiles Trp-Asp (WD) repeats profile. 116 149 IPR001680 GO:0005515
Lele01g1044 632 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 304 IPR001680 GO:0005515
Lele01g1044 632 FunFam Protein ROOT INITIATION DEFECTIVE 3 1 242 - -
Lele01g1044 632 Gene3D - 1 214 IPR015943 GO:0005515
Lele01g1044 632 SMART WD40_4 162 203 IPR001680 GO:0005515
Lele01g1044 632 SMART WD40_4 206 244 IPR001680 GO:0005515
Lele01g1044 632 SMART WD40_4 109 148 IPR001680 GO:0005515
Lele01g1044 632 SMART WD40_4 69 106 IPR001680 GO:0005515
Lele01g1044 632 SMART WD40_4 256 295 IPR001680 GO:0005515
Lele01g1044 632 SUPERFAMILY WD40 repeat-like 5 317 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1044 Lele-ChrLele01 6039493 6046862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1044 501 626 Cytochrome P450 AT2G22330 31.515 2.66e-22 99.4