Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1040 ATGAACACGCAAGGTTTGCTCTCAGAGATGCAAGATCCGCCTTCAAACCCTACCCCCAATCCCTCTTCTCACAATGCCAATGCCAATGCCGCCTCTCAATTCCCGCCACCGCCGACGGCGACTCCCGCAGCCTCCTCTTCGTCTTCTTCGCTCTTCATGAGGGGAGGAGCTGCTGCCACTGGCGTCGGTGGGTCCCACCCACTCCACCACCACCATAGGAGGGCCCACTCCGAGGTTAACTTCCGTTTGCCCGATGACATGATGGGTCTGTCGCCGTCCGATCCGTTCAATGGCGGCTCATCCACGGCTAGCCTTGAAGAGATCGGATCCGAGGACGACCTCTTCTCCACTTACATTGATGTTGACAAACTCGGAGGTGCTAACGGATCGGGAAGTGGTGGCGATGGATCAGATCAGAATGGCAATGGGAATGGCGTCGGCACAAGCAATCGCAATGAAAGAGAGAAGAGCCCGAGTGCAAGGCCAAGACACAGGCATAGTAGCTCCGTGGACGGGTCGACTTCTACAAGCATGTTTGGAGAGATTATGGAGGCAAAGAAGGCTATGCCTCCAGATAAGTTAGCTGAACTGTGGACTATTGATCCCAAGCGTGCCAAGAGAATCCTCGCGAATCGACAATCTGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATTCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAACTTACACTGTACCAGAGGGACACAACAGGTCTGAGCACAGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAACAACAGGCACAGCTTCGAGATGCTCTTAATGAGGCATTGAAGAAGGAAGTTGAGAGACTTAAGATTGCAACTGGGGAGATGATGAGCCCTTCCGAATCATTTAATCTGGGAATGCACCAGATGCAATTTACAGCTTCAAACTTCTTTCCATTTCCACCACAGTCAGGGCCTTCTGGTCACCAGAGCATGCAGTTGCCGTCATTCAATCACCCGTCTAATATGCCAGCTCATCATCAACATCAACTGCAACAAACGAACTCTCATCCGTTCTCAGAAATGATGCAGAATGACCAACTTGGTCGTTTGCAGGGGCTTGACATTAGTAGCAAAGGATCACCCTTTATGAAGTCTGAAGCCCCCTCACTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1212 0.5066 MNTQGLLSEMQDPPSNPTPNPSSHNANANAASQFPPPPTATPAASSSSSSLFMRGGAAATGVGGSHPLHHHHRRAHSEVNFRLPDDMMGLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGANGSGSGGDGSDQNGNGNGVGTSNRNEREKSPSARPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPSESFNLGMHQMQFTASNFFPFPPQSGPSGHQSMQLPSFNHPSNMPAHHQHQLQQTNSHPFSEMMQNDQLGRLQGLDISSKGSPFMKSEAPSLSASESSTTF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1040 403 MobiDBLite consensus disorder prediction 323 377 - -
Lele01g1040 403 MobiDBLite consensus disorder prediction 1 104 - -
Lele01g1040 403 FunFam probable transcription factor PosF21 202 255 - -
Lele01g1040 403 SUPERFAMILY Leucine zipper domain 203 254 IPR046347 GO:0003700|GO:0006355
Lele01g1040 403 MobiDBLite consensus disorder prediction 132 153 - -
Lele01g1040 403 CDD bZIP_plant_RF2 204 253 IPR044759 GO:0003700|GO:0006355
Lele01g1040 403 Coils Coil 267 298 - -
Lele01g1040 403 MobiDBLite consensus disorder prediction 323 403 - -
Lele01g1040 403 Pfam bZIP transcription factor 203 258 IPR004827 GO:0003700|GO:0006355
Lele01g1040 403 Gene3D - 202 254 - -
Lele01g1040 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 201 264 IPR004827 GO:0003700|GO:0006355
Lele01g1040 403 SMART brlzneu 199 263 IPR004827 GO:0003700|GO:0006355
Lele01g1040 403 MobiDBLite consensus disorder prediction 154 168 - -
Lele01g1040 403 MobiDBLite consensus disorder prediction 126 177 - -
Lele01g1040 403 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 367 - -
Lele01g1040 403 Coils Coil 219 246 - -
Lele01g1040 403 MobiDBLite consensus disorder prediction 386 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1040 Lele-ChrLele01 6017339 6019916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1040 10 403 bZIP Transcription Factor Family AT2G40620 50.930 3.94e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele01g1040 bZIP_1 6.6e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1040 01 6017339 6019916 Lele01g1040 01 6017339 6019916 ECH
Lele01g1040 01 6017339 6019916 Lele03g1043 03 6041390 6045968 hybridization
Lele01g1040 01 6017339 6019916 Lele04g1042 04 6464271 6466903 hybridization