Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1037 ATGCCCTCCCTACAACCACATAAACCACACACCAAAGAGCCAAACACCATAACACATTACTCACTTTCTGCTTCTTTTCTCCTCACAATGCCCCACCACATTTCTTCTTCTTCTCCTTCTCCTACTGCAATAATGTTTCTCATTGTTGTCTCCATCAGCATTCTCCTCCAAGGCTTCACCGCCACTGGGTATGGCGATTGGCAGAGCGCTCATGCCACCTTCTACGGCGGTGGTGATGCCACCGGCACAATGGGAGGAGCATGTGGGTATGGGAATTTGTACAGTCAAGGGTATGGAACAGACACGGCAGCTCTGAGCACAGCTCTGTTCAACAATGGCTTAAGCTGTGGGGCTTGTTATGAATTAAGATGTAGCAGTGACCCAAGATGGTGCAAGCCCGGCTCCATCATTGTCACTGCCACAAACTTTTGCCCTCCAAACTTAGCTTTGCCCAACAACAATGGAGGTTGGTGCAACCCTCCACTTCAACACTTTGACATGGCTGAACCTGCCTTCCTCCAAATCGCTCAATACAGAGCAGGGATCGTCCCTGTTTCCTTCAGAAGAGTGCCGTGTATGAAGAAGGGAGGAGTAAGGTTCACCATCAATGGGCATTCATATTTCAACTTGGTTTTGATCACCAACGTGGGAGGTGTAGGGGATGTTCATGCGGTGTCAATCAAAGGGTCGAGAACAGGGTGGCAATCCATGTCCAGGAACTGGGGCCAGAACTGGCAGAGCAACTCTTACCTGAATGGCCAAGCTCTGTCTGTCCAAGTCACCACAAGTGATGGTAGGACCCTCACAAGCTACAATGTGGCACCTCCTAATTGGCAGTTTGGCCAGACCTTCCAAGGTGGTCAGTTTTAA 870 0.4977 MPSLQPHKPHTKEPNTITHYSLSASFLLTMPHHISSSSPSPTAIMFLIVVSISILLQGFTATGYGDWQSAHATFYGGGDATGTMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYELRCSSDPRWCKPGSIIVTATNFCPPNLALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGVGDVHAVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQALSVQVTTSDGRTLTSYNVAPPNWQFGQTFQGGQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1037 289 PANTHER EXPANSIN-A15 45 289 IPR002963 GO:0009664
Lele01g1037 289 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 85 197 IPR007112 -
Lele01g1037 289 FunFam Expansin 197 289 - -
Lele01g1037 289 Gene3D - 197 289 IPR036749 -
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 66 81 IPR007118 GO:0005576
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 272 286 IPR007118 GO:0005576
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 180 196 IPR007118 GO:0005576
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 84 102 IPR007118 GO:0005576
Lele01g1037 289 PRINTS Expansin/Lol pI family signature 106 124 IPR007118 GO:0005576
Lele01g1037 289 Pfam Expansin C-terminal domain 198 275 IPR007117 -
Lele01g1037 289 PRINTS Expansin signature 97 111 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 172 185 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 272 288 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 243 264 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 124 135 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 155 172 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 196 208 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 136 146 IPR002963 GO:0009664
Lele01g1037 289 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Lele01g1037 289 SUPERFAMILY PHL pollen allergen 194 286 IPR036749 -
Lele01g1037 289 Pfam Lytic transglycolase 102 187 IPR009009 -
Lele01g1037 289 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 207 286 IPR007117 -
Lele01g1037 289 SUPERFAMILY Barwin-like endoglucanases 66 215 IPR036908 -
Lele01g1037 289 SMART dpbb_1 102 187 IPR007112 -
Lele01g1037 289 Gene3D - 56 193 IPR036908 -
Lele01g1037 289 FunFam Expansin 57 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1037 Lele-ChrLele01 5997235 5998303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1037 40 289 Expansin Gene Family AT2G40610 77.291 4.82e-146 408