Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1033 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGAAAGCAGAAAGGATCTCATGCTGTGAAGAACCAAGCAAGCTCACCAGTAATGTCCCAGAGATCGCCCCCAAATTGTTTGCATTATTTCCCCACTGAACCTTACAAAGCTGGTATTCTTTTCAACTCACCAATTCAGACCAAAGTCACAGACTTTTCATTCACTGTTTCTCCGAGAAGGTCATCCAAGAGAAGAGTTCAGAGGAAAACTACTTACAAGCCTTCTCCCTCAGTTGTGTCCTCTGTCTCAACCTCTTGCAGATGCCATTGGACTCATCAGCCAAATCAAGCCGAGTCTCCGGATTTCTATGCTTCTTCCATTGAGAGTTCTTCCTCTGAATTAGATCTCTATGAATGTGTTACATCTGAGTCAGATGAGTGTGATAGCTTAGCAGCTCCCCACATGTTGAATGGACTATCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCATAGACATGAACAACGAATCATTTGCTGTGAATCCTGAAAAGCTAGATGGGTTTGATGCAATTTCGAAATTAGGCCTTCCTCCTATAGTGACAAAACCTGTGAGGTTTGATGATCAGGTCATTGAAGCACATTACTTGAAATGTTCATCTACGGTGGAGGAAAGCAGCAGAACTACAACTCCAAAGTTCTCTGGTAATTCAAGAGGAATAAGACTTAGAGTCAATTCTGCAAAAATTGCAAGTAGGAAAGTTCAAGCCTGTGCAAGAAGGAGTGTATCATCATCATCATCCTCCAGTGCATGCAAGGTTTCAAGGAACACAGCAGGGTTTGCAGAAGGTTTTGCAGTTTTCAAGTCCTCAATTGATCCACAAAGAGATTTCAAGGAGTCAATGGTGGAGATGATAAGAGAGAACAATATATGGTCATCAGAGGATTTGGAGGATCTTCTAGCTTGTTATCTCTCACTTAACTCAAGAGAATACCATGAACTCATAATCAAAGCATTCGAGCAAACTTGGTTTGACTCGGCTCAACTCAGAATGTAA 1089 0.4141 MGNHRFKLSDMIPNAWFYKLKDMSRSRKQKGSHAVKNQASSPVMSQRSPPNCLHYFPTEPYKAGILFNSPIQTKVTDFSFTVSPRRSSKRRVQRKTTYKPSPSVVSSVSTSCRCHWTHQPNQAESPDFYASSIESSSSELDLYECVTSESDECDSLAAPHMLNGLSPDCSCRVSSSTNDIIIDMNNESFAVNPEKLDGFDAISKLGLPPIVTKPVRFDDQVIEAHYLKCSSTVEESSRTTTPKFSGNSRGIRLRVNSAKIASRKVQACARRSVSSSSSSSACKVSRNTAGFAEGFAVFKSSIDPQRDFKESMVEMIRENNIWSSEDLEDLLACYLSLNSREYHELIIKAFEQTWFDSAQLRM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1033 362 ProSiteProfiles OVATE domain profile. 297 356 IPR006458 -
Lele01g1033 362 MobiDBLite consensus disorder prediction 82 102 - -
Lele01g1033 362 Pfam Transcriptional repressor, ovate 301 355 IPR006458 -
Lele01g1033 362 MobiDBLite consensus disorder prediction 33 49 - -
Lele01g1033 362 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Lele01g1033 362 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 355 IPR038933 GO:0045892
Lele01g1033 362 MobiDBLite consensus disorder prediction 27 49 - -
Lele01g1033 362 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 296 355 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1033 Lele-ChrLele01 5975069 5976157 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele01g1033 Ovate 1.3e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1033 01 5975069 5976157 Lele01g1033 01 5975069 5976157 ECH
Lele01g1033 01 5975069 5976157 Lele03g1035 03 5995593 5997286 hybridization
Lele01g1033 01 5975069 5976157 Lele04g1035 04 6414335 6415426 hybridization