Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1030 ATGCCAGAGATCGAACGCGTGCCGGAGAATAACAACGCCTTGTTCGGTAAATATGAGCTCGGAAGGATTTTGGGTTGTGGAGCCTTCGCGAAGGTTTACTTCGCCCGCAATGTCCAGAACGGCCAGAGCGTCGCCATTAAGGTCATCAACAAGAAGAAGATATGTGGCACCGGGCTCGTGTCTAATGTCAAGCGTGAGATTACCATCATGAGTCGCCTCCATCACCCCAATATCGTCAAGCTCCACGAGGTCTTAGCCACCAAGACAAAGATCTACTTCGTCATGGATTTGGTCAAGGGTGGCGAATTGTTTGCCAAGATCTCCAAGGGACGCTTCAGCGAGGACCTTAGCCGGAAGTATTTCCAACAGTTGATATCCGCCGTCGGGTACTGCCACTCCCGCGGCGTGTTCCACCGTGACTTGAAACCCGAGAATCTCTTGCTCGACGAGCATGGGAATCTGAAGGTTTCGGATTTCGGACTCAGTGCCGTAAAAGATCAGATCCGAACAGATGGGTTGCTCCACACACTTTGTGGCACTCCGGCTTACGTCTCACCGGAGGTTTTGGCCAAGCAAGGGTACGATGGAGCAAAGGTGGATGTGTGGTCCTGTGGCGTTATCCTCTTTGTATTGACAGCCGGGTACCTACCGTTCAACGACCCGAACCTCATTAACATGTACAAGAAGATATACAAAGGCGAATATCGGTGTCCCCGGTGGATGTCACCCGACCTCCGGCGTTTTCTGTCGCGGCTCCTAGACAACAACCCGGATACAAGAATCACCATCGATGAGATCCTCCGGGACCCGTGGTTCAAGAAAGGGTACAAGGAGGTTAAATTTCACGAGGAACATGGCGGGTCTTCATCAGGGACGAAGCCCGACGAGGCGGAGAAGATGACTTATCTGAATGCATTTAGCATCATCTCGTTCTCCTCCGGTTTGAACCTGTCAGGTTTGTTCGATGACCCGCACAACACAAATGAGGAAACCGAGCGGTTCGTGTTGACGGAATCACCGGAGAAGCTGATGGAGAGAGTGGAGGAGATCGCCAAGGTGGAGAAACTCGTCGTGAGAAGGAAGGAGTGTGGGATTGAGCTGGAGGGGCAGAAAGGTAATTTCGGGATTAGTGTTGTTGTTTACCGTTTAATGGAAAGCCTGGTATTAGTGGAGGCCCAAAGAAGAGGCAGATCCGGTGTCAACTTCTGGAAGAACAAGCTTAAGCCTCAGCTCTGTGCTGCTACAGGTCAAGAAACAGATTCCCAGGTTGCCGGTGACTAA 1281 0.516 MPEIERVPENNNALFGKYELGRILGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLVSNVKREITIMSRLHHPNIVKLHEVLATKTKIYFVMDLVKGGELFAKISKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDEHGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVSPEVLAKQGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLINMYKKIYKGEYRCPRWMSPDLRRFLSRLLDNNPDTRITIDEILRDPWFKKGYKEVKFHEEHGGSSSGTKPDEAEKMTYLNAFSIISFSSGLNLSGLFDDPHNTNEETERFVLTESPEKLMERVEEIAKVEKLVVRRKECGIELEGQKGNFGISVVVYRLMESLVLVEAQRRGRSGVNFWKNKLKPQLCAATGQETDSQVAGD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1030 426 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1030 426 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lele01g1030 426 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Lele01g1030 426 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Lele01g1030 426 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Lele01g1030 426 Gene3D Kinase associated domain 1, KA1 299 414 - -
Lele01g1030 426 FunFam Non-specific serine/threonine protein kinase 8 301 - -
Lele01g1030 426 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1030 426 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Lele01g1030 426 Pfam NAF domain 301 359 IPR004041 GO:0007165
Lele01g1030 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele01g1030 426 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Lele01g1030 426 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1030 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 394 - -
Lele01g1030 426 CDD CIPK_C 304 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1030 Lele-ChrLele01 5956495 5957775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1030 1 424 CBL-interacting serine-threonine protein kinases AT2G30360 64.220 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele01g1030 Pkinase 1.8e-71 CL0016