Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1024 ATGGCGGCGACTCACAGCAGCAGCAACAAGATGAAGACGATGATGACGTGTCGACGTCCTGACCAGTTAACCAAACAGCCATCGAATCTCTCCTGTTCCGAAGGCTACCACGGAGACGAAACCGCTTCTGTTCCATTCACGTGGGAATCACAGCCAGGTACTCCCAAGCACCAATTCCGGGAAACCACCCTTCCTCCTCTCGCTCCTCCTCCCTCTTATTACTCTTACTCTGCTTCTTCTTCTTCTACTCCGAGATCCATTCTTAAACCTCATAAGAACAAGAATTATTCTGCTCCTAAGTCCAATAATCTCTTGCAATCTATATTACCCAAGCGTACCGCAAGGAAATCGCGTGGTGGTGCTCCTCCACCGCTGCCGCCGTCACCACCTGCTAATTCTTCGCCATCTCTGTCGTTTTCTCCCTCCTCCTCATCTTCGTCTTCGTCGTATCAATCGTGGAAGAGATCGCGTTCCGTGCCGTCTACACCAACGAGGCGTCCGAGAAAGGAGAAGGAGGACGAAGAAGATCTGTATGATGTGCCTGGTTCGGGTATGTGCTTTGGTAATGCGGGTTTTAGAGGGCGTTATTCCTCCATGATCAAGAAGGTTATGCTAAGAGATTTTCTAAATACTTCTACACCTATTTGTGTTTGTGCCTCAAAGAAAAGTCCTTCTTCCTTACAGCTCCACCACACTGATCAATACATTCAAGAGGCATGCTTGGATGTCCAGAAACAGATACCAACTGAATATAAAAGAGCAGAAGAGATAGCGAAGAGCACAACAGAGGCGACAGAAGCGTCTTGTCAAATGGGAAGGAGGAATTTCTATGGACCAGCAGTTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCTTGTAAGCTTCTGAGAAGAAGATGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGAACCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTGCCTGAGAGCCAAAGAGCAGATGCAGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAAGAAGTTCAGTCATTACAAGCAGAGCTAAATGCTTTAAGATCTGAGATTCTCAAGTACAAGTATAGAGAAGCTGCGAATCAGATCATTTCTTCTCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGAACCTATTTCTGTAGAATCACAACAACAAGGACTTGTTCATCAGCCTCAACCTCAACCTCCTCCTCCTCCTCCACCAAAACCATCATCATTACCTTCTTGTGCTTCTGTTAATGTTCTTTCATCCTTGTCTTCATCTTCCAGTTCTAACGTATACACCCCCCCTAAGAGCACAATCAGCCATGGATCTATCTCCAGCGAAAATGTTTCAGAGTCTGTGCCATCTGCTGAAGATTTTGTAGAATTTTCAAAGTTGAAAGAGCTTGAAGGAGATGAAGAGATGATAACGGGCTTTGAATTTGATGATCATATTTAG 1563 0.4575 MAATHSSSNKMKTMMTCRRPDQLTKQPSNLSCSEGYHGDETASVPFTWESQPGTPKHQFRETTLPPLAPPPSYYSYSASSSSTPRSILKPHKNKNYSAPKSNNLLQSILPKRTARKSRGGAPPPLPPSPPANSSPSLSFSPSSSSSSSSYQSWKRSRSVPSTPTRRPRKEKEDEEDLYDVPGSGMCFGNAGFRGRYSSMIKKVMLRDFLNTSTPICVCASKKSPSSLQLHHTDQYIQEACLDVQKQIPTEYKRAEEIAKSTTEATEASCQMGRRNFYGPAVSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQQEVQSLQAELNALRSEILKYKYREAANQIISSHGGALVSSVEEPISVESQQQGLVHQPQPQPPPPPPPKPSSLPSCASVNVLSSLSSSSSSNVYTPPKSTISHGSISSENVSESVPSAEDFVEFSKLKELEGDEEMITGFEFDDHI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1024 520 ProSiteProfiles LOB domain profile. 290 391 IPR004883 -
Lele01g1024 520 MobiDBLite consensus disorder prediction 135 160 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 44 58 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 163 178 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 120 134 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 1 180 - -
Lele01g1024 520 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 287 436 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 448 489 - -
Lele01g1024 520 Pfam Lateral organ boundaries (LOB) domain 291 387 IPR004883 -
Lele01g1024 520 MobiDBLite consensus disorder prediction 431 447 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 422 489 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 73 110 - -
Lele01g1024 520 Coils Coil 370 397 - -
Lele01g1024 520 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1024 Lele-ChrLele01 5932042 5936581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1024 251 399 AS2 family AT2G30340 73.510 1.26e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele01g1024 LOB 3.9e-40 No_clan