Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0997 ATGGCTAGGTTATACCCTCCCCTTTTGCCGCCGCCACCGCCACCGCAAGCACTCAACCAATGGCGGTGGCATCTTCATCCACCTCCATCTCCTCAACATCATTTATCCGTTTCTTCCCATATCCAAATGAATGAAACCGTCGCGCTTCCCATCATTTGTCGTCCCGCCTTCGAGGGTCGAAGTGATGGCATCTTCTTTGGAGAAAACCCTTTGACCTACACCTTCCCTTTCCTCCTCTTCGAGTTCTCTGTCATCGTCCTTCTCACACGCGTCATTCGTTTCCTCCTTAAGCCTCTCAAACAACCTAAGATCATCGCCGAAATTATCGTACGTAAGCTTCTCATCCTAATTATCTCTTGCATAATTGTATATATATGTATCTCTAGTGTATTATCTTCTTTCCATAATTTGATTCAAAGCTTTTATATTTTTAAGGCTGGCATCTTTTTGGGACCCTCAGTTCTGAGACACAAAACATGGTTTGCAAAGAATATACACCCTGAAAACGCTGAATTTGTGGTCAACAATATTGGCGTAATGGGCTTCATGTTTTTTCTTTTCGTGTATGGCGTGAAGATGGACACTAGCCTCATAAAAAAAACAGGGAAAAAGCATATTTCTATAGCTTTGATAAGTATACTCGTTCCCTCAATATCAGTTTTTTCTGTGGCGATGACCATGAGAAAGAACATGGACCAAGAGCTCGCCAAGATAACTTCATTAGGGGGCATTGCTATGTACATGGGACTCTCGTCATGTCCACTACTATTCATCGTCCTTAAAGATAACAACCTTCTTAGCTCCGAAGTGGGTCGATCAGCTATATCTACTGGTCTAATTGGTGACTTTGTTGGTATAACTATTGCAGTGGTGTTTGAAGCTGGAAAACAAGGAGACACAGGGACCATGCATGCTTTGTGGTTTATGATCTCCCTGGCAGTTTATTCGCTTATTTTTTTTGTACTTATTCGAAGAGGGATGTTGTGGATTGGTGATATAACCCCAGAAGGACACGCAGTGAAATCGGATTATGTCACTTTGATTCTGTTGGGGATTTTTGTGGCGTCGTTTATGACTGACTTGGTCGGCTTATCGATCGGAGCCGGGGCGTTATGGCTAGGGTTGGTGATTCCGGCTGGTCCTCCTTTAGGGACAACCATTTTGGAGAAGACAGAGACAGTTATGACAGAGTTTTTTATGCCATTCTCGTTCCTTTTGATCGGATACAACACTGATGTGTATGCCATGATTGCTGCTGGTTGGTCCTATGTTCATCCATTGTTCTGCATGGCTTTAACTGCGTATTTGACCAAGTTTTTCTCCACTTGGTTCACTACCATCTATTGGCGTATGCCTTTCAGAGATGGATTACCCCTCAGTCTCATCTTGAGCTTAAGAGGCCAGATCGAACTCATATTGTTCATGCACTGGCTGGACAAAAAGATGATAAAGCCACCAGGTTACACGATATTAGTGCTGATGACGATAGCTGTGACAGCAATATTCACTCCTTTGATCATGATCCTCTACGATCCATCAAAACCATACATGGTGAACAAAAGGAGAACCATTCAACATACCCCTCCGGGCTCAGACCTCGTCATCATACTCTCCATCCTCGACAGAGAAAGCATAAGTGGCATCATCAACCTCCTTGAACTTTCTGCTCCCACATCAGGGAATCCCATGTCCATCTTCGCCCTTCACCTCATCGAGCTCTTAGGCCGAACCAACCCTGTCTTCTTCGACCACGACGAACAACAAGTCCCTCCAAAATACAAATGCGTCCAAACCATTAATGCCCTCACGCAATTTCAGAGCGTCAAAGGCTTCGACTCTGTTAAGCTTCATTTCTTCACTGCCATCACAAGCAAGCAAACCATGTACCAAGATGTATGTGAGCTAGCTTTAGAGAACAAAGCCACTCTGATCGTCTTATCACTTTATCAGGGAGCTATCACTCATAACCTCGAAGGAACAATAGTATCGGGGGAGGGATCAAGAACCGTGATATCCAATGTTTTAACTCAAGCTCCTTGCTCCGTCGGGATTCTCGTAGACAAGAGTGAGAATATCGGGAGCTTTATCAGAGGACAAGACAGTGTCAATGATTCGTTTGGTCGATCAGGACTGAAGCTTGCCGTTTTGTTTCTGGGAGGGGCGGATTGTAGAGAGGCTTTAGTTTATGCCGATCGAATGGTGGCGGGAAACGAAGAGTTGAGTTTGACGGTGGTGAGGTTTCTGGCGTTTAACCATGAAGGGGAGACGGAGACGGAGAAGAAGCTGGACGACGGAATGATGACATGGTTCTGGGTGAAGAATGAACGGAACGAGAAGGTGGAGTACAGAGAGGTGGTGGTTGAGGACGGCGAGCAGACGGTGGGAGCGATTCGGATGATGAATGATGGAAGTTATGATCTGTGGATTGTGGGGAGGAGACAGGGAATGAACCCTGTGATTCTGAGTGGGTTATCTAATTGGAGTGAGAATGAAGATTTAGGAGTGATAGGAGACTATGTTGCGTCTGTAGATTTTAGTAGTTCTGCTTCTGTTTTAGTTATGCAGCAGCAGATCCTTAGAGGGTAA 2586 0.4497 MARLYPPLLPPPPPPQALNQWRWHLHPPPSPQHHLSVSSHIQMNETVALPIICRPAFEGRSDGIFFGENPLTYTFPFLLFEFSVIVLLTRVIRFLLKPLKQPKIIAEIIVRKLLILIISCIIVYICISSVLSSFHNLIQSFYIFKAGIFLGPSVLRHKTWFAKNIHPENAEFVVNNIGVMGFMFFLFVYGVKMDTSLIKKTGKKHISIALISILVPSISVFSVAMTMRKNMDQELAKITSLGGIAMYMGLSSCPLLFIVLKDNNLLSSEVGRSAISTGLIGDFVGITIAVVFEAGKQGDTGTMHALWFMISLAVYSLIFFVLIRRGMLWIGDITPEGHAVKSDYVTLILLGIFVASFMTDLVGLSIGAGALWLGLVIPAGPPLGTTILEKTETVMTEFFMPFSFLLIGYNTDVYAMIAAGWSYVHPLFCMALTAYLTKFFSTWFTTIYWRMPFRDGLPLSLILSLRGQIELILFMHWLDKKMIKPPGYTILVLMTIAVTAIFTPLIMILYDPSKPYMVNKRRTIQHTPPGSDLVIILSILDRESISGIINLLELSAPTSGNPMSIFALHLIELLGRTNPVFFDHDEQQVPPKYKCVQTINALTQFQSVKGFDSVKLHFFTAITSKQTMYQDVCELALENKATLIVLSLYQGAITHNLEGTIVSGEGSRTVISNVLTQAPCSVGILVDKSENIGSFIRGQDSVNDSFGRSGLKLAVLFLGGADCREALVYADRMVAGNEELSLTVVRFLAFNHEGETETEKKLDDGMMTWFWVKNERNEKVEYREVVVEDGEQTVGAIRMMNDGSYDLWIVGRRQGMNPVILSGLSNWSENEDLGVIGDYVASVDFSSSASVLVMQQQILRG 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0997 861 Pfam Sodium/hydrogen exchanger family 117 505 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele01g0997 861 Gene3D - 77 514 IPR038770 -
Lele01g0997 861 PANTHER CATION/H + ANTIPORTER 53 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0997 Lele-ChrLele01 5778009 5780708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0997 28 858 Antiporter Super Family AT5G58460 40.588 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0997 01 5778009 5780708 Lele01g0997 01 5778009 5780708 ECH
Lele01g0997 01 5778009 5780708 Lele03g0998 03 5795283 5797963 hybridization
Lele01g0997 01 5778009 5780708 Lele04g1001 04 6217802 6218950 hybridization