Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0996 ATGGCAGTTGATGCTAAAGATCCATTTCAGTTGATGAGCAAGTGTCTAGCATTTTATGAAGGAAGGCAACGAGAGAATAATCTCGCATTCAAAATCTACTTCCATCCTGCTCCTGCCAGATTCAAAATCTCTCAACATCGAAGTTTCACAAGAATTCTACCTGAAAGGGTCAGTTTGCCCGTCACGCTTTCGGATTTGGGGGCAGAATCGGAGCCCAATTTTTCTCCTTTTCTGCCTACAATCCTAATCCTATTCATGGCCACGGACGTAACTGCCGAATTCCAAAACCCCGATTTCCGGCCCGTTCCGCAGCCGCCAGATTTCCATCCAGAGCTCGCCGAGTCACCTCACGACGGGCTCCATTTTTGGCAGTTCATGATCGCCGGTTCCATTGCCGGCTCCGTCGAGCACATGGCGATGTTCCCCGTCGACACCGTGAAGACCCATATGCAAGCTCTCGGGTCATGCCCAATTAAGTCCGTCAGCGTTCGCCAAGCCCTCCAATCGATTTTAAAATCAGAGGGTCCATCTGCACTATACCGAGGGATAGGCGCCATGGGTCTTGGTGCTGGACCAGCACACGCTGTGTATTTTTCCTTTTATGAGGTCTGTAAGAAGTATTTTTCTCATGGGGATCCCAAAAACTCCACTGCCCATGCGATTTCTGGTGTTTGTGCTACTGTTGCGAGCGATGCTGTGTTTACACCCATGGATATGGTGAAGCAGAGATTGCAATTGAGTAACAGTGGTTACAAGGGTGTTTGGGACTGTGTGAAGAGGGTTTTGAGCGAGGAGGGGTTAGGGGCATTTTATGCATCTTATAGGACTACAATTGTGATGAACGCCCCATTTACAGCAGTGCATTTTGCAACTTATGAGGCTGCAAAAAGAGGCCTTAAGGAGATTTCGCCTCAGAGTGCTGATGATGAACGTTTGGTTGTTCATGCAACCGCTGGAGCTGCTGCTGGTGCATTGGCTGCTGCTGTTACCACACCGCTTGATGTGGTCAAAACTCAATTGCAGTGCCAGGGTGTTTGCGGATGTGATAGATTCAAGAGTGGTTCAATTGGGGATGTTATTAAAACTATAGTGAAAAAGGATGGGTACAGAGGGCTTATGCGAGGCTGGATTCCTAGGATGCTATTCCATGCTCCTGCGGCTGCAATCTGCTGGTCCACATATGAAGCTGGAAAGGGCTTTTTCCAAGAGTTCAATCAAAGACAAGATAAGTGA 1233 0.4826 MAVDAKDPFQLMSKCLAFYEGRQRENNLAFKIYFHPAPARFKISQHRSFTRILPERVSLPVTLSDLGAESEPNFSPFLPTILILFMATDVTAEFQNPDFRPVPQPPDFHPELAESPHDGLHFWQFMIAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSFYEVCKKYFSHGDPKNSTAHAISGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVLSEEGLGAFYASYRTTIVMNAPFTAVHFATYEAAKRGLKEISPQSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKGFFQEFNQRQDK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0996 410 FunFam Mitochondrial carrier protein, expressed 215 409 - -
Lele01g0996 410 Pfam Mitochondrial carrier protein 120 210 IPR018108 -
Lele01g0996 410 Pfam Mitochondrial carrier protein 311 403 IPR018108 -
Lele01g0996 410 Pfam Mitochondrial carrier protein 215 300 IPR018108 -
Lele01g0996 410 SUPERFAMILY Mitochondrial carrier 118 395 IPR023395 -
Lele01g0996 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 298 IPR018108 -
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 319 341 IPR002067 GO:0055085
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 182 202 IPR002067 GO:0055085
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 271 289 IPR002067 GO:0055085
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 138 152 IPR002067 GO:0055085
Lele01g0996 410 PRINTS Mitochondrial carrier protein signature 125 138 IPR002067 GO:0055085
Lele01g0996 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 310 400 IPR018108 -
Lele01g0996 410 PANTHER MITOFERRIN-1-RELATED 114 405 - -
Lele01g0996 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 207 IPR018108 -
Lele01g0996 410 Gene3D Mitochondrial carrier domain 217 409 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0996 Lele-ChrLele01 5754233 5757359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0996 86 405 Chloroplast and Mitochondria Gene Families AT1G07030 77.090 1.57e-176 493