Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0964 ATGGCATCAACGGCTAGTTTTTTGTGGTTCTCCCTCGGGTTGGCCTCCTTCTTGTCTTGTGTTGGGTCCTTGTCGGAGATCGAAGCTCTAACGTCTTTCAAGCTTAGCCTCCACGACCCTCTCGGCTCCTTGGACGGCTGGGATCCTTCCGCCCCTTCCGCTCCTTGTGACTGGCGTGGCATTTTCTGTTACGGCAACCGAGTTCTTGAGCTTCGTTTGCCTCGCCTTCAACTCACCGGTCCGCTCTCGGATTCCCTCTCCAGCTTGCTTCAACTTCGCAAGTTGAGCCTTCATTCTAACAACTTCAATGGCGCCATTCCTCCTTGTCTCTCTCAATGCCTGCTCCTGCGTTCCGTTTATCTTCATAATAACTCGTTTTCGGGTAAACTCCCGCCGGCTCTTCTCAACCTCACCAACCTTCAAATCCTCAACGTTGCTCACAACTTTCTTTCTGGCCGAATTACCGGAGATTTTTCGAACTCTCTCAGGTTCCTTGATTTATCGTCGAATGCGTTTTCCGGTGATATTCCGGCTAATTTCTCGTCAAAATCTCAGCTACGACTCATCAACTTGTCCTACAATCGGTTTTCTGGTAGAATACCGGGTACTGTTGGAGTTCTGGGGCAGCTTGAGTATCTCTGGCTGGACTCCAACCAGTTGTATGGGACTCTGCCTTCGGCTCTAGTTAACTGCTCTTCTCTTGTGCATCTAAGCGCCGTAGACAATGCGCTTTCCGGTTTTATTCCGGCGACCATGGGGATGATGCCGAGACTTCAAGTGCTGTCGTTGTCATCGAATCAACTATCGGGATCGGTCCCCACTTCACTGTTTTGCAATGTCCACTTGGCCAATTCTTCGCTGAGAATCGTTCAATTAGGCTTTAATACACTCACGGGCATTTCCGAGCCGCCAAATGCAAGGTGTGTTAATGTTTTGGAGATTTTAGAGCTTAAGGAGAATCGTATTCGCGCTGCATTTCCCTCCTGGTTGACCAATGCGACGTCGTTAAGAGCTGTTGATTTCTCCGGAAACTACTTTTCTGGTATTTTGCCGGCTGATATTGGGAATTTATTGAGGCTAGAGGAGCTGAGGGTGGCAAACAATTCATTATCTGGTGATGTTCCTCGTGAAATTGTGAAATGTACTTTGTTACAGGTTCTTGATCTTCAAGGAAACCTATTCTCCGGCCTCATTCCTTCATTTCTTGGCCAGCTGAGGAACCTCAAGATGTTATCTCTTGGCGATAACCTGTTTACTGGTCCTATACCCACGAGTTTGGGAACACCTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACGGGGGTTATACCCCCAGAATTAATGCGATTGGGTAATATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCAGGCCAACTTTCGTCTGCCATCGGGGACTTAACGGCTTTGCAGATTTTGAATTTGAGTCATTGTGGGTTTTCAGGAAAGATTCCTGCTAGCGTCGGCGGTTTAATGAAACTAACGGTGCTGGATTTAAGTGGACAAAGTCTTTCAGGTGACTTGCCAATCGAGCTTTTCGGATTACCTAGCCTGCAGGTTGTTGCTCTTCAAGAGAACCACTTATCTGGAGCTGTTCCAGAGGGTTTCAGCAGTATAGTTACTCTACAATATCTTAACATCAGCTCCAATGTCTTTGCTGGTGAAATTCCAGCTACTTATGGATTTCTTCGGTCATTAATTGTTCTTTCTGCATCTGAGAATCATATTTCTGGTAGAATAGCATCAGAGATTGTTAACTGTTCTCAACTTGAAGTGCTCGAGCTTCGTTCAAACCGTTTGCATGATAACATTCCTGGCTACATCGACCGTCTGAATCGTTTAAGGGTCCTAGATTTGGGAAACAACGAGTTAACAGGAGATATTCCAGAACAAGTATCTGAATGTTCTGCTTTGACTTCACTCCTCTTGGATGCTAATCAACTAACGGGTCAAATACCAGAATCCTTGTCCAGTTTATCAAACTTGACTGCGTTGGATCTCTCCTCAAACCAATTGAGCGGAGACATTCCGGCCAGCCTGTCACTCATATCTGGTTTGAAGCATTTAAATGTCTCCAGAAATAATCTTGAGGGTGAAATTCCAGAAATGCTGAGCTCCCGATTCAATGATCCTTCTATATTTGCAATGAATAGCAGGTTATGCGGAAAGCCACTGCATAGAGAATGTGCAAATGTAGGGAGGCGAAAGAGGAGGAGGCTAATAATATTCATAGGTGTGGCTCTAGGTGGATTATGCCTTTTGGGACTATGCTGCTGTGGCTATATTTACAGCCTCTTACGTTGGCGCAAGAAGCTGAGAGAAGGATTGACGGGGGAGAAGAAGAAGAAGAGCCCGGCTCGTTCAAGTTCAGGAGCAGACAGAGGTCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGCAGAGACACTGGAAGCAACAAGACAATTTGATGAAGAGAACGTGTTGAGCAGAGGAAAGTACGGTCTTGTGTTCAAAGCCTCTTACCCAGATGGAATGGTGCTCTCAATCCGTCGTCTTCCTGACGGATCTATCGAGGAAAGAACCTTCCGTAAAGAAGCAGAATCATTAGGAAAAGTGAAGCACCGTAATTTAACAGTATTGCGTGGCTATTATGCAGGTCCACCTGACGTGAGGCTTCTTGTTTATGACTACATGCCCAATGGAAACCTTGGCAATCTTCTCCAAGAAGCATCTCAGCAAGACGGCCATGTACTGAATTGGCCAATGCGTCATCTTATCGCTCTAGGCATTGCTCGTGGGCTAGCATTCCTACATTCAGTCTCAATAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAACAATCGCAACCCCAGCAGAAGCATCGTCCTCGTCCACTCCCATAGGATCACTAGGGTACGTATCGCCGGAAGCAGCGTTAACCGGGCAGGCGAGCAAGGAAGCTGATGTGTACAGCTTTGGGATCGTATTGCTGGAGATACTGACCGGAAGAAAACCGGTGATGTTCACGCAAGACGAAGACATAGTGAAATGGGTGAAAAGGCAATTGCAGAGAGGTCAGATATCGGAATTGCTTGAGCCTGGGTTGTTAGAGCTAGACCCTGAGTCATCGGAATGGGAGGAGTTCTTGCTGGGGATCAAAGTGGCTCTTCTATGCACATCACCGGATCCTCTTGATCGGCCGTCAACGAGTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTCGGACCGGAGATTCCATCGTCGGCCGATCCCACCACGTTACCTTCCCCTACTTGA 3390 0.4646 MASTASFLWFSLGLASFLSCVGSLSEIEALTSFKLSLHDPLGSLDGWDPSAPSAPCDWRGIFCYGNRVLELRLPRLQLTGPLSDSLSSLLQLRKLSLHSNNFNGAIPPCLSQCLLLRSVYLHNNSFSGKLPPALLNLTNLQILNVAHNFLSGRITGDFSNSLRFLDLSSNAFSGDIPANFSSKSQLRLINLSYNRFSGRIPGTVGVLGQLEYLWLDSNQLYGTLPSALVNCSSLVHLSAVDNALSGFIPATMGMMPRLQVLSLSSNQLSGSVPTSLFCNVHLANSSLRIVQLGFNTLTGISEPPNARCVNVLEILELKENRIRAAFPSWLTNATSLRAVDFSGNYFSGILPADIGNLLRLEELRVANNSLSGDVPREIVKCTLLQVLDLQGNLFSGLIPSFLGQLRNLKMLSLGDNLFTGPIPTSLGTPSELESLNLSNNKLTGVIPPELMRLGNMSALNLSNNKFSGQLSSAIGDLTALQILNLSHCGFSGKIPASVGGLMKLTVLDLSGQSLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSIVTLQYLNISSNVFAGEIPATYGFLRSLIVLSASENHISGRIASEIVNCSQLEVLELRSNRLHDNIPGYIDRLNRLRVLDLGNNELTGDIPEQVSECSALTSLLLDANQLTGQIPESLSSLSNLTALDLSSNQLSGDIPASLSLISGLKHLNVSRNNLEGEIPEMLSSRFNDPSIFAMNSRLCGKPLHRECANVGRRKRRRLIIFIGVALGGLCLLGLCCCGYIYSLLRWRKKLREGLTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGKYGLVFKASYPDGMVLSIRRLPDGSIEERTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGNLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRITIATPAEASSSSTPIGSLGYVSPEAALTGQASKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTSPDPLDRPSTSDIVFMLEGCRVGPEIPSSADPTTLPSPT 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0964 1129 MobiDBLite consensus disorder prediction 787 815 - -
Lele01g0964 1129 Pfam Leucine Rich Repeat 696 714 IPR001611 GO:0005515
Lele01g0964 1129 Pfam Leucine Rich Repeat 480 501 IPR001611 GO:0005515
Lele01g0964 1129 ProSiteProfiles Leucine-rich repeat profile. 671 693 IPR001611 GO:0005515
Lele01g0964 1129 SUPERFAMILY L domain-like 285 610 - -
Lele01g0964 1129 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lele01g0964 1129 Gene3D Phosphorylase Kinase; domain 1 811 910 - -
Lele01g0964 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 312 1109 - -
Lele01g0964 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1115 - -
Lele01g0964 1129 SUPERFAMILY L domain-like 21 301 - -
Lele01g0964 1129 Pfam Protein kinase domain 837 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0964 1129 Gene3D Ribonuclease Inhibitor 160 454 IPR032675 -
Lele01g0964 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0964 1129 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 449 742 - -
Lele01g0964 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 351 446 - -
Lele01g0964 1129 SMART serkin_6 835 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0964 1129 SUPERFAMILY L domain-like 546 726 - -
Lele01g0964 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 301 - -
Lele01g0964 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Lele01g0964 1129 SUPERFAMILY Protein kinase-like (PK-like) 814 1118 IPR011009 -
Lele01g0964 1129 Gene3D Ribonuclease Inhibitor 24 159 IPR032675 -
Lele01g0964 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Lele01g0964 1129 Gene3D Ribonuclease Inhibitor 455 742 IPR032675 -
Lele01g0964 1129 PRINTS Leucine-rich repeat signature 432 445 - -
Lele01g0964 1129 PRINTS Leucine-rich repeat signature 669 682 - -
Lele01g0964 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Lele01g0964 1129 Pfam Leucine Rich repeat 670 685 IPR001611 GO:0005515
Lele01g0964 1129 SMART LRR_typ_2 137 160 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 207 231 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 621 645 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 430 453 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 525 548 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 357 381 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 89 113 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 669 693 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 405 429 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 255 279 IPR003591 -
Lele01g0964 1129 SMART LRR_typ_2 477 501 IPR003591 -
Lele01g0964 1129 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515
Lele01g0964 1129 Pfam Leucine rich repeat 503 560 IPR001611 GO:0005515
Lele01g0964 1129 Pfam Leucine rich repeat 599 658 IPR001611 GO:0005515
Lele01g0964 1129 ProSiteProfiles Leucine-rich repeat profile. 431 452 IPR001611 GO:0005515
Lele01g0964 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1115 - -
Lele01g0964 1129 SMART LRR_sd22_2 669 698 - -
Lele01g0964 1129 SMART LRR_sd22_2 621 647 - -
Lele01g0964 1129 SMART LRR_sd22_2 255 282 - -
Lele01g0964 1129 SMART LRR_sd22_2 405 437 - -
Lele01g0964 1129 SMART LRR_sd22_2 597 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0964 Lele-ChrLele01 5574130 5577519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0964 1 1128 Receptor kinase-like Gene Family AT1G75640 64.846 0.0 1373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele01g0964 Pkinase 4.2e-32 CL0016