Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0927 ATGAGCAGCAGCTTTGCGACAATGGCGTCGAGCTCGACTTGGACTGCGAAGCAGAACAAGAGATTTGAGAATGCTCTGGCGTTGTACGACGAGGATACGCCGGAGCGGTGGCAGAAGCTGGCGAGGGCGGTGGGAGGGAAGACGGTGGAGGAAGTGAAGAGGCATTATGAGAAGCTTGTTGAAGATGTGAGGCTCATCGAGGAAGGCCACGTCCCTTTGCCTAATTACAATACCAGCGCTCAGCCATCACTAGGAGGAGGAACAAGAACTTACACTACTTACTTGGATGATCAACAGCGAAGGATGAAGAGTCTGAGCCTCCAGTGA 327 0.5291 MSSSFATMASSSTWTAKQNKRFENALALYDEDTPERWQKLARAVGGKTVEEVKRHYEKLVEDVRLIEEGHVPLPNYNTSAQPSLGGGTRTYTTYLDDQQRRMKSLSLQ 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0927 108 Gene3D - 6 73 - -
Lele01g0927 108 SUPERFAMILY Homeodomain-like 12 67 IPR009057 -
Lele01g0927 108 CDD SANT 13 60 IPR001005 -
Lele01g0927 108 FunFam Transcription factor SRM1 6 73 - -
Lele01g0927 108 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Lele01g0927 108 SMART sant 10 62 IPR001005 -
Lele01g0927 108 ProSiteProfiles SANT domain profile. 9 64 IPR017884 -
Lele01g0927 108 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Lele01g0927 108 ProSiteProfiles Myb-like domain profile. 6 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0927 Lele-ChrLele01 5361406 5361934 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele01g0927 Myb_DNA-binding 5.6e-06 CL0123