Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0903 ATGGCTCCGAAATATTTAGAAGCAGCATTGGTGAGTCCCAAAATGGACGTTTACGCCTTTGGAGTGGTGTTGCTGGAACTTATCACAGGGAAAGATTCTATCATTGAACAAGCTGGAAATGAAGTAAGGCTTTCTACAGTGATGGGGTCTGTCATGGCAAAGGAAAACGATGATGCAGAAGCCAATCTTAGCGTTGATCCTAAACTTACTGGAATCAGTGGGAAATCATGTGCCATTGAGCTAGCTAGAATTACCGTAGCTTGCTTAGTCCAAGAACCAGCAAGGAGACCAAGCATGGCAGACATTGTTTCTAGCTTATTAAGGATACAGACGAATGTCGTGCCTCGGAGAATGTTATCACCCGCCATAAATAGTAACAGTCCACGCATGGAGAGGGCCTCCGTTCCTTGGACGGAGCTAGCAAATCTTCGTTTCGGTTAA 441 0.4512 MAPKYLEAALVSPKMDVYAFGVVLLELITGKDSIIEQAGNEVRLSTVMGSVMAKENDDAEANLSVDPKLTGISGKSCAIELARITVACLVQEPARRPSMADIVSSLLRIQTNVVPRRMLSPAINSNSPRMERASVPWTELANLRFG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0903 146 SUPERFAMILY Protein kinase-like (PK-like) 1 133 IPR011009 -
Lele01g0903 146 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0903 146 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Lele01g0903 146 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 112 - -
Lele01g0903 146 Pfam Protein tyrosine and serine/threonine kinase 1 106 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0903 Lele-ChrLele01 5227377 5228623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0903 1 109 Receptor kinase-like Gene Family AT1G51940 33.333 1.17e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele01g0903 PK_Tyr_Ser-Thr 2.1e-07 CL0016