Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0865 ATGAAGATTCTGGTTACAGGTGCATTCGGTTACCTTGGGGGAAGGCTCTGTAATGGTTTGCTCCTCAAAAGGTACTCAATTAGGGTCCTCGCAAGGCCAACCAGTGATCTCTCAGCTCTTCCTTCGCCTGCCGATGCTGGAGCTCTTGAAATCGTCTACGGTGATGTTACTGACTATGCTTCTCTTCTGTCTGCCTGCTCCGGCTGCCGCATCATCTTCCACTTAGCAGCTCTAGTCCATCATGAAAAGTTTTTCTGCACTGGATATGAGAAATCAAAGGCTGCTGTGGATAAAATTGCACTGCAAGCTGCTTCAGAGGCCATACCATTAGTGGCGCTTTATCCCGGGGTTATCTACGAGCCTGGAAAAGTCACGGCAGGAAACATTGTTTGTCAGATGGCTACGGAAAAGTATAGATTTTCTTTTAGCCATGTTGATGACGTAGTGGAGGGACACATTGCTGTAATGGAAAAAGGGAAACCTGGCAATAGGTATCTGCTAACAGGTGAAAATGTATCATTTGCACATGTTTTTGATATAGCTGCAGTCATCACTAATACAAAAAGGCCATTCTTTAATATCCCTCTGTGGGTGATTGAAGCATATGGTTGGTTATCAGTTTTGTTCTCTCGAATCACTGGAAAGCTTCCCATCATCAGTCCACCAACAGTTCATGTTTTAAGGCATCGATGGGAATATTCCTGCGATAAGGCTAAAAGGGAGTTTGATTATAGACCCAGAAGTTTTGAAAGACGGACTAGCAGAGTCGAATGCACGCGCACCAATCGCAGAGACGAGGCCGGCACTCCTCGTGTGTTGCGGGCGATGCCTGGCGCCGTGAATTGCGGTCTCCTTCGAGGGTCAATGGTCTTGTCATCTTTCAGTGTCAGGGCGTCGGGATCCGAGTTTTTCGATCACATACAGCAATGGGCGTCGACAATGTCAACCAAGAGTGAACATCATACGGTCCCCCTTTCGGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCAGAAATTCAGCATGGTCAAGCAAGCCAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTGTCGACATATTCTGTTTTTGCAGTATGTTACTTTCATCCTGTTCTTCAACTTGGTTCACCAGAAGAACTTTTGGCTACCATTGCAATGAACCTATTTGATGGACACAAAGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAATAATATTTTAAGTGTGATTCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTACCTCGGGCTTTAGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGACAGTTGCTAGACTTTGGCATGTTAATGCTAGACTTTGCCCATTGGATATGGACCCGTGCTTGTTGCAGGCAGCAGATCCAACTAGCTTTAAGTTTTTTATGCTACCATGTCTTGCGCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTGGTCACTGTTGCATCTGTCGGTGATTCCCGATGCATACTTGAACCTTCTGAAGGTGGGCTTTATTACTTATCAGCAGATCACAGGCTAGACACCAATGAAGAGGAGGTGACACGTATATCGAGTAGTGGGGGTGAGGTCGGTCGGCTAAATACTGGTGGAGGTGCAGAGCTGTCAACATCTGGAGGCAGACTTATCATCTGCAGTGATGGTGTTTGGGATGCTCTATCTGCAGAAACAGCCCTTGATTGTTGTCGTGGGATGTCACCAGAGGTTGCAGCACCGCGTATCGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCAGAGAAACAACCTGCTCCTCCTCTGACACATGCTAAAAGACCAATAAAAGTAATGTTTAGATCCATGTTTTGGAGAAAGTCTGCAGAATCATCTTCTTATCACGAAAAGGATTATATGGAGCCTGATGTGGTAATGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATATCCACTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGTATATCAATACACGAAGGGGCATCCAACCCGGCGAAATTGCATCCCTGGGATGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAGAAAAATTAGGTGA 2277 0.455 MKILVTGAFGYLGGRLCNGLLLKRYSIRVLARPTSDLSALPSPADAGALEIVYGDVTDYASLLSACSGCRIIFHLAALVHHEKFFCTGYEKSKAAVDKIALQAASEAIPLVALYPGVIYEPGKVTAGNIVCQMATEKYRFSFSHVDDVVEGHIAVMEKGKPGNRYLLTGENVSFAHVFDIAAVITNTKRPFFNIPLWVIEAYGWLSVLFSRITGKLPIISPPTVHVLRHRWEYSCDKAKREFDYRPRSFERRTSRVECTRTNRRDEAGTPRVLRAMPGAVNCGLLRGSMVLSSFSVRASGSEFFDHIQQWASTMSTKSEHHTVPLSVLLKRESASEKIEKPEIQHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFAVCYFHPVLQLGSPEELLATIAMNLFDGHKGSAAAIYAKENLLNNILSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETVARLWHVNARLCPLDMDPCLLQAADPTSFKFFMLPCLAQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLYYLSADHRLDTNEEEVTRISSSGGEVGRLNTGGGAELSTSGGRLIICSDGVWDALSAETALDCCRGMSPEVAAPRIVKEAVQAKGLRDDTTCIVIDILPPEKQPAPPLTHAKRPIKVMFRSMFWRKSAESSSYHEKDYMEPDVVMELYEEGSAMLSERLDTKYPLCNMFRLFTCAVCQVEMKPGEGISIHEGASNPAKLHPWDGPFLCRSCQDKKEAMEGKRKIR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0865 758 CDD PP2Cc 403 630 IPR001932 -
Lele01g0865 758 ProSiteProfiles PPM-type phosphatase domain profile. 379 630 IPR001932 -
Lele01g0865 758 Pfam Protein phosphatase 2C 497 561 IPR001932 -
Lele01g0865 758 SUPERFAMILY PP2C-like 398 630 IPR036457 -
Lele01g0865 758 Gene3D - 397 571 IPR036457 -
Lele01g0865 758 PANTHER PROTEIN PHOSPHATASE 331 562 - -
Lele01g0865 758 Gene3D - 572 646 IPR036457 -
Lele01g0865 758 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 250 IPR036291 -
Lele01g0865 758 Pfam NAD dependent epimerase/dehydratase family 3 81 IPR001509 -
Lele01g0865 758 Gene3D - 1 82 - -
Lele01g0865 758 Gene3D - 83 261 - -
Lele01g0865 758 SMART PP2C_4 334 628 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0865 Lele-ChrLele01 4995197 5003956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0865 314 755 PP2C-type Phosphatase Gene Family AT1G47380 62.343 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0865 01 4995197 5003956 Lele01g0865 01 4995197 5003956 ECH
Lele01g0865 01 4995197 5003956 Lele03g0861 03 5022644 5024918 hybridization
Lele01g0865 01 4995197 5003956 Lele04g0864 04 5292738 5297091 hybridization