Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0852 ATGGACTGTGGCACCAGTGATGGGCCAAAGTGGTCATTCTCATGGGCGTCGCATGATGAGATGGACTTCATGCCGCTGCCTCCCCAATTCTCAGGAGCTTACACTCACCATTTTGAAGAGACGGCGGGCTTGCATCTGCCACCGCCTGAGCTCTGTGGAACAACACTGACGATCGACAAACCTAATTGGTGGTCACTCGCGAGTACAAGTACATCAACGTCGTCGTCTCTGGGTAACCCTAGTCCACAACAACAGGAGCAAGCCAACTCGATGAGGGAGATGATATTTAGGATAGCGGCGATGCAACCGATACACATAGACCCAGAATCAGTGAAGCCTCCAAAGAGGAAGAACGTCAAGATATCGAAGGACCCTCAGAGCGTGGCCGCTCGGCATCGCAGAGAAAGAATCAGCGAGAGAATAAGGATAATGCAGAGATTGGTGCCAGGTGGCACTAAAATGGACATCGCCTCTATGTTAGATGAAGCTATTCACTACCTCAAATTCCTGCAGTCCCAGGTTCACTCCCTCCAACGAGCTGCCGCCACAGATAATACCCCATCATCGTCACTCGCTGATCTCTTCATGTCCTCAGCTGGCTCCAATTATAATCCATCCTCTAATTATCTTTATCTGCATAAACCTCCCCAGCGTCCTCATAATCCACACCATTACTGCTGA 681 0.5022 MDCGTSDGPKWSFSWASHDEMDFMPLPPQFSGAYTHHFEETAGLHLPPPELCGTTLTIDKPNWWSLASTSTSTSSSLGNPSPQQQEQANSMREMIFRIAAMQPIHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRIMQRLVPGGTKMDIASMLDEAIHYLKFLQSQVHSLQRAAATDNTPSSSLADLFMSSAGSNYNPSSNYLYLHKPPQRPHNPHHYC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0852 226 MobiDBLite consensus disorder prediction 109 133 - -
Lele01g0852 226 Pfam Helix-loop-helix DNA-binding domain 131 171 IPR011598 GO:0046983
Lele01g0852 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 180 IPR036638 GO:0046983
Lele01g0852 226 Gene3D - 120 188 IPR036638 GO:0046983
Lele01g0852 226 FunFam BHLH transcription factor 124 188 - -
Lele01g0852 226 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 72 215 IPR045843 GO:0003700|GO:0006355
Lele01g0852 226 SMART finulus 127 176 IPR011598 GO:0046983
Lele01g0852 226 MobiDBLite consensus disorder prediction 108 133 - -
Lele01g0852 226 MobiDBLite consensus disorder prediction 69 88 - -
Lele01g0852 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 121 170 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0852 Lele-ChrLele01 4928507 4929187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0852 72 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.545 9.70e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele01g0852 HLH 1.4e-05 No_clan