Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0851 ATGGCTCTTCTTCTGGACAATTGCGATGCCATACTACTCTCCCTTGACCCTCACAAGTCGGTGCCCGCTCCATTCCTCACCAAGACCTACCAACTCGTAGATGATCCCGCGTCCGATCACATCGTCTCTTGGGGTGAAGACGACACCACTTTCGTCGTCTGGCGTCCCCCTGAGTTTGCTCGTGATCTCCTCCCCAACTACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGCCAGCTTAACACCTATGGTTTCAGAAAGATTGTGCCGGACAGATGGGAGTTTGCCAATGAATTCTTTAAGAAGGGAGAGAAGCACTTGCTGTGCGAGATCCACCGCAGGAAAACGGCTCAGCCTCATCATCATCAGAACCACCACGGAGTTGGCGTTGGCGCCCCTGGTTTCTTTCCCTTTCCTTCCAGGCTCAGCATCTCTCCTCCCAGTGACTCCGACGACCAGTACAATTGGTGTGACTCACCGCCGCTCACTTCTCCGGCTCCCGTTTCTTCCATCATCAACGGCGATAACTACAACTCTTCCTTCACCGCTCTTTCCCAGGACAACGAAAGGCTCAGACGAAGCAACAACATGCTCATGTCCGAGCTCGCACACATGAAGAAGCTTTATAACGACATCATCTACTTCGTTCAAAACCACGTCAAATCGGTCCCTCCGAGCAGTTCCTACCCTTCCTCTTTGCTGTCTCCATCCATGACCACCGCAGCTACTAATGGTTCCATGGCGCAAAGGCCCCTGAACCAGCTTTTGGGATATTATTCCATGAACAATAAGCAGGCTCCGCCTCTTGTGAACTCACCCACCAACACATTGAAGAGCTCCATAACCATAGTTGAAGAGCCCACCAATAACAGCTGTAAGACCAAGCTCTTTGGTGTGTCGCTTCAATCTAAGAAAAGAGTGCACCCTGAGTACGGTTTTAATCCCTCCAATTCTTCGGACGCCAGCAAGGCTCGTTTCGCTTTGGAAAAGGATGACTTGGGCTTGAATCTCATGCCTCCTTCGACTTGTTATTACATAAATGCCAGCGGCAGAGGGAGAGAGAGAGACGAGTTCCTTACAGTTCCATTGGGTCAAAAGCTGAGAACTGAGAATAAGAAGCTAGGCTAG 1128 0.5053 MALLLDNCDAILLSLDPHKSVPAPFLTKTYQLVDDPASDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHHQNHHGVGVGAPGFFPFPSRLSISPPSDSDDQYNWCDSPPLTSPAPVSSIINGDNYNSSFTALSQDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKSVPPSSSYPSSLLSPSMTTAATNGSMAQRPLNQLLGYYSMNNKQAPPLVNSPTNTLKSSITIVEEPTNNSCKTKLFGVSLQSKKRVHPEYGFNPSNSSDASKARFALEKDDLGLNLMPPSTCYYINASGRGRERDEFLTVPLGQKLRTENKKLG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0851 375 Gene3D - 17 116 IPR036388 -
Lele01g0851 375 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 262 IPR027725 -
Lele01g0851 375 FunFam Heat stress transcription factor B-4 17 115 - -
Lele01g0851 375 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0851 375 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0851 Lele-ChrLele01 4921643 4923268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0851 19 342 HSF AT1G46264 57.558 4.39e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele01g0851 HSF_DNA-bind 5.3e-32 CL0123