Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0847 ATGACAAACTATGCGTTTCTGAACGATCAGCTTTCGGCTCACACCTCAATTTTTGGGTTACGACTGTGGGTTGTGTTGGGCATATGCGTAGGAGCAGCCATTGTTATTCTCCTGTTTCTCATATCTCTCTGGTTCACCAAGCGCAACATCAATTCTTCCAACCACAACTCTTCACAAAATCTTACCATTCCGAATGTCTCCAAGGAGATCCAGGAAATCAGGATTGACCCTTCGCGTGACCCAACCCGTGGAATGTCCGACTCGTATCCGGAAGCAGAGGCTGAGGTGGATAGAGCCCTCGTTCAGCAGCAGGGGAATGATAGCCAGAGAATTCACATAGAGATCGGTAAAGATCACCGGATTTCTTATCCTGAGAAGGCTGGTGGTTCGTCGCATGGTGGAAGTGGTGAGCAGGGTTCAATTTCTGTGCCTGAGGTTTCGCATTTGGGATGGGGCCATTGGTACACTCTCAGAGAGCTTGAGGTCTCTACCAACGGGTTTGCCGACGAGAACGTCATCGGTGAAGGTGGCTACGGAATTGTTTATCGCGGGGTGTTGCAAGATGATACGGAAGTTGCGATTAAAAATTTGCTGAATAACAGGGGACAAGCTGAGAAGGAATTTAAGGTAGAGGTTGAAGCAATTGGGCGTGTTCGGCACAAGAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCTCATCGTATGCTTGTGTACGAGTATGTTAACAATGGAAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCTAGTCCTCTGACATGGGAGATTCGCATGAATATAATACTGGGAACAGCAAAAGGGGTGACATACCTTCACGAGGGACTTGAACCTAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATATTGCTCGATAAACAATGGAATGCAAAAGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGGATCAGAGAGAAGTTACGTGACAACCCGTGTTATGGGAACATTCGGGTATGTGGCTCCAGAATATGCAAGTACCGGCATGTTAAACGAAAGAAGTGATGTGTACAGCTTTGGTGTTCTTATCATGGAGATAATTTCTGGAAGAAACCCGGTAGATTACAGCAGGCCTCCAAGAGAGGTGAATCTGGTCGAGTGGCTGAAGTCTATGGTTGCTAACCGGAATGCAGAGGCTGTGCTCGATCCTAGGCTACCTGAGAAGCCTTCTTCAAGGGCACTGAAGCGTGCCTTATTAGTAGCTTTGAGATGTGTAGATCCAAATGCCCAGAAAAGGCCAAAGATGGGGCATATTATACATATGCTTGAAGCTGATGAGTTCCCTTCTCGAGATGACCGAAGAACTGGAAGGGAAAATGGACGTTCCCAGCGGATGATCACAAGAGATGAATTGAAAGATAAGCGAGTATGTGAATCAGGTGACAGTAGTGGATATGAAAGTAGTGTCCAAACTAGCAAGTCCATGGGCAGAAACCAAGAAACCGAAGACCAATAG 1503 0.4664 MTNYAFLNDQLSAHTSIFGLRLWVVLGICVGAAIVILLFLISLWFTKRNINSSNHNSSQNLTIPNVSKEIQEIRIDPSRDPTRGMSDSYPEAEAEVDRALVQQQGNDSQRIHIEIGKDHRISYPEKAGGSSHGGSGEQGSISVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLQDDTEVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGVTYLHEGLEPKVVHRDIKSSNILLDKQWNAKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPREVNLVEWLKSMVANRNAEAVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEADEFPSRDDRRTGRENGRSQRMITRDELKDKRVCESGDSSGYESSVQTSKSMGRNQETEDQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0847 500 MobiDBLite consensus disorder prediction 445 500 - -
Lele01g0847 500 CDD STKc_IRAK 173 439 - -
Lele01g0847 500 Gene3D Phosphorylase Kinase; domain 1 144 242 - -
Lele01g0847 500 PANTHER OS01G0323000 PROTEIN 3 463 - -
Lele01g0847 500 SMART serkin_6 167 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0847 500 FunFam Probable serine/threonine-protein kinase At1g01540 147 242 - -
Lele01g0847 500 Gene3D Transferase(Phosphotransferase) domain 1 243 453 - -
Lele01g0847 500 SUPERFAMILY Protein kinase-like (PK-like) 151 438 IPR011009 -
Lele01g0847 500 FunFam Putative receptor-like serine/threonine-protein kinase 243 453 - -
Lele01g0847 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Lele01g0847 500 ProSiteProfiles Protein kinase domain profile. 167 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0847 500 Pfam Protein tyrosine and serine/threonine kinase 171 438 IPR001245 GO:0004672|GO:0006468
Lele01g0847 500 MobiDBLite consensus disorder prediction 477 493 - -
Lele01g0847 500 MobiDBLite consensus disorder prediction 445 476 - -
Lele01g0847 500 Coils Coil 187 207 - -
Lele01g0847 500 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0847 Lele-ChrLele01 4893563 4895798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0847 19 489 Trihelix Transcription Factor Family AT1G70460 37.938 1.29e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele01g0847 PK_Tyr_Ser-Thr 2.6e-47 CL0016