Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0845 ATGGAAGAGCCTCAATGCTCCAGAGTCATTTTGCCTGCCTCGCTCCCACCTGGTTGCCGTTTCTATCCATCCGAAGAGCAGCTGCTCTGTTACTATTTATCCAACAAGCATGCCGGCGGTAATTTCCATGGTTGTGATCTGATCAGGGAGCTTGACCTGTACGATTACGATCCTTTCCAATTGCCTGAAATTGCGTGCTTTTCCTATGGTTATCGCGGAAGGAAGAGGCATTGGTATTGCTATACTGCCAGGGTTTTGAAGGATGCTAGGAGGAAGACTAGGATGGTTAAGAGCGGGCATTGGATGAGAAAGGGAGGGGTTAGGAATTTTTTTAATGGTGGTGGGAATGTCGTCTTGGGCACCAGGACCACTTTCGTTTTCTATCTGGGGAATTCCCCCAAGAAAGCCAGCAGGACGAATTGGATGCTCCATGAGTATGCACTAGTTGATCATATTAAGGCTTCATTTGTTGTTTGCCGAGTATTTTTTAAAGCATGTTATAAGAATAGTGTGTCAGAGAATGGTCTGTGTTCCTGTGCGGAGGAAAGTTTCTCAGCTGTACGTCACATCGGCATTCAGCATGATGGATATGTTTCACCTGATATAATTGAGGCTCAAATGCGGGGTGACTGCTCCATTGATAGAAAGATTGCAGCGTCTCCCTTGACACCTGCTAGTGAACTAGATGAGAATCAAACTGCAGCTGCATCAGCTTCTATTGCTGCTTTCCAGTATTGTGCAGGTCCTCAAGACCGTCAAACGGGAAAGTTTTCTGGACTTCCTGGTGGTGGTGCAACATTCGTTGAAGATTTGGCATCTCAGCAACATTTATTTTCTATTCTAGAGGAGGATTTCATAGAGTTGGATGACCTAGCTTGA 879 0.4562 MEEPQCSRVILPASLPPGCRFYPSEEQLLCYYLSNKHAGGNFHGCDLIRELDLYDYDPFQLPEIACFSYGYRGRKRHWYCYTARVLKDARRKTRMVKSGHWMRKGGVRNFFNGGGNVVLGTRTTFVFYLGNSPKKASRTNWMLHEYALVDHIKASFVVCRVFFKACYKNSVSENGLCSCAEESFSAVRHIGIQHDGYVSPDIIEAQMRGDCSIDRKIAASPLTPASELDENQTAAASASIAAFQYCAGPQDRQTGKFSGLPGGGATFVEDLASQQHLFSILEEDFIELDDLA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0845 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 214 - -
Lele01g0845 292 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Lele01g0845 292 Gene3D NAC domain 24 167 IPR036093 GO:0003677|GO:0006355
Lele01g0845 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Lele01g0845 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0845 Lele-ChrLele01 4878951 4882203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0845 14 182 NAC Transcription Factor Family AT3G15500 34.831 3.91e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele01g0845 NAM 5.2e-24 No_clan