Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0844 ATGCAGTCGTCCTGCAGTTCCTCCATGGGAAGCATGAAGGTGCATCAGTTGGCACGTGGACTCATGTGGGAGCACGAACCCTCCCTCACCCTTGGCTTCAAACGCTTACGCCCTCTTGCCCCCAGGCTCCACAACACTAATACTAACTCTCTTTCTTCTTTCGATCTCAACACCTTTATCAGACCCGACAGTGGCCCCAGAAAACTCCCTTCCCCTCACCATCATCTTCACAAAGAGGAATCGCAGCCAGGAGGAACGAGGTGGAATCCCACTCAGGAACAGATAGGGATATTGGAGATGCTCTACGGAAGTGGAATGCGAACTCCAAATGCTGAGCAGATAGAGCAGATCACTGTTCAGCTTGGCAAATACGGCAAGATCGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCAGAAACGTAACCCTAATACTACTAGTACCACTTCTTCGATTTCTTTAACTTTAGACGCACGGGGCCAAGTAGGAGAAGGAGAGGAAGATAGCCCTCTGAGTAAGAAGTGTAGGAGCTTGGCCTTTGAGGGTTTTCAATTAGAAGAAAGCAGAGGAGATAAGAAGCTGTCTGTCTGTACTGCACTCACTATTCCTGACTTTGAAATGGAAGCGCCGTTTATGTCTCTGTATTTTGTTGGTTACAGCTCCATGTAG 693 0.4805 MQSSCSSSMGSMKVHQLARGLMWEHEPSLTLGFKRLRPLAPRLHNTNTNSLSSFDLNTFIRPDSGPRKLPSPHHHLHKEESQPGGTRWNPTQEQIGILEMLYGSGMRTPNAEQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNPNTTSTTSSISLTLDARGQVGEGEEDSPLSKKCRSLAFEGFQLEESRGDKKLSVCTALTIPDFEMEAPFMSLYFVGYSSM 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0844 230 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Lele01g0844 230 Gene3D - 71 160 - -
Lele01g0844 230 CDD homeodomain 86 147 IPR001356 GO:0003677
Lele01g0844 230 SUPERFAMILY Homeodomain-like 83 151 IPR009057 -
Lele01g0844 230 FunFam WUSCHEL-related homeobox 4 85 152 - -
Lele01g0844 230 MobiDBLite consensus disorder prediction 62 90 - -
Lele01g0844 230 MobiDBLite consensus disorder prediction 67 82 - -
Lele01g0844 230 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Lele01g0844 230 MobiDBLite consensus disorder prediction 142 179 - -
Lele01g0844 230 MobiDBLite consensus disorder prediction 150 165 - -
Lele01g0844 230 PANTHER WUSCHEL-RELATED HOMEOBOX 4 12 197 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele01g0844 230 SMART HOX_1 83 150 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0844 Lele-ChrLele01 4874752 4875738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0844 12 150 Wox Gene Family AT1G46480 61.438 4.89e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele01g0844 Homeodomain 2.6e-18 CL0123