Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0836 ATGTTGTTGGAAAGGTGTATGACAGTTGTGAAAAGAAAAAAACTTCCCAATACAGTAGTGGTGGGCCTTTTGGGCCCCACATTACGAGCTGTCAATCCATTTAGTTGCCAGCCCATAGCTCTTTCTCTTCTCTCCCACTTTTCATCAGTAACTCGGGTGTGTGCTTGCCTCTGGAAAATGGAAACTGGACTGCCCTTGCTTAATTGCCTCTTGCCGCATACTCTGAGAAGTTTCTGTTCCCCTTCTGACTCTTCCACTACTTCTTCTAAGTGGGTATATGCTGTCTTTTGGAGAATATTGCCGCGAAACTATCCTCCCCCAAGGTGGGAATTTGGAGGGACTGATCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGATCCTGGTTTGGGAAGATGGATTCTGTGATTTTAACGAATGTGAAAGAGCAAGAAGTGGATACCTCAACGGGAAGTTTGGAGCTCACGTGTTCTTCAAAATGTCACATGAGGTCTACAGTTATGGGGAAGGATCACTGGGCAAAGTGGCTGCAGATAACAGTCACAAATGGGTGTACAGAGACAGCCCAAATGAGTCTGAACCTAGCTACATCGCTTCGTTGAATGAGTCCGTTGAGCCACGACCACGTGCGTGGGAATATCAGTTCAATTCAGGAATTCAGACCATTGCCATCATTGCGGTGAGAGAAGGCATAGTTCAATTGGGTTCGCTTAACAAGGTTGCAGAAGATCTCAGTCTAGTGATCAACATACAGAGGAAATTCAGCTTCCTTCAGAGCGTACCAGGCGTCTTCGCTATTCAAAGACCATATCTACCCATCCAACATCCTTACGTGCTCAAACCTAACATCCAGATGATGGAAAGCGATGAAACGGTGCTCTCTGTGTACAATATGAATCAAATGAGTGGTTTGAAAAGGATGATTGAGGAACCACCAAACAATGCTTCAAGGAAATCTATTAACTTGGGCTGGAATTCCCCACTTACTCCTTCCCTGCCCTTGCTGCCTAAGATCCCCTCTCTAGCTCCTTCCTATAATTATATTACACTTCATGACGCTAGGATTAATAGCTCAAGCCATAGAGTGAAGGTTGAAGAGTTCGCATTTCATCACGCTAATGAAGCTGACCAGAAATGTTCCTTCAATACTGATATAGAGTAA 1161 0.4462 MLLERCMTVVKRKKLPNTVVVGLLGPTLRAVNPFSCQPIALSLLSHFSSVTRVCACLWKMETGLPLLNCLLPHTLRSFCSPSDSSTTSSKWVYAVFWRILPRNYPPPRWEFGGTDLDRSKGNKRNWILVWEDGFCDFNECERARSGYLNGKFGAHVFFKMSHEVYSYGEGSLGKVAADNSHKWVYRDSPNESEPSYIASLNESVEPRPRAWEYQFNSGIQTIAIIAVREGIVQLGSLNKVAEDLSLVINIQRKFSFLQSVPGVFAIQRPYLPIQHPYVLKPNIQMMESDETVLSVYNMNQMSGLKRMIEEPPNNASRKSINLGWNSPLTPSLPLLPKIPSLAPSYNYITLHDARINSSSHRVKVEEFAFHHANEADQKCSFNTDIE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0836 386 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 254 IPR025610 -
Lele01g0836 386 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 61 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0836 Lele-ChrLele01 4829228 4832098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0836 75 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.579 1.35e-16 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0836 01 4829228 4832098 Lele01g0836 01 4829228 4832098 ECH
Lele01g0836 01 4829228 4832098 Lele03g0828 03 4844886 4847351 hybridization
Lele01g0836 01 4829228 4832098 Lele04g0834 04 5105767 5107231 hybridization