Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0825 ATGGAGACTCGCGCCGCAAAGAGAAGAGCAGAGGCCGCCACCTTGGCCCAGAACCGTTCACCCAAGAGGAAGCGTGTAGTCTTGGGAGAACTTCCCAATTTATCCAACCTTATTGAGCCTGGGACTTCGAATCCGGAGTTGGAGCCACAGAAACCAAAATATCGAAGGAATACGAGGGTTAAGAAAGCCGCGACAACCAAGAGTAGCTTCTCTTCGGGTGATCCCAAGTCGGATGACGCGAAGGCAGTTCGCACTGATGCAAAGTCAGGCACCGATGTGATTTTGGATGATTTGCAAAGTAGCGAGGCTTATGTTCCGGACATCTATAAGTATCTTCGCAAAATGGAGGTGGAGCCAAAGAGAAGACCAATGCCTGATTACCTAGAGAAAGTTCAGAAAGATGTTACCGCCAACATGAGGGGAATACTGGTTGATTGGTTAGTAGAAGTTGCAGAGGAGTACAAGCTTCTCTCTGACACTCTTTACCTCTCTGTTTCGTACATTGATCGCTTCCTCTCTACCAAGCTAGTCACAAGGCAGAAGCTTCAGTTGCTGGGTGTTTCATCTATGTTCATCGCATCGAAGTATGAAGAAATTAGCCCTCCTCATGTGGAAGAGTTTTGCTACATAACCGATAATACATACAGGAAGGCAGAGGTTGTAGAAATGGAGGCTGCTATACTCAAATCTCTAGATTTTGAAATGGGTAGCCCCACCGTGAAGACGTTTCTAAGGAGATTTACTGGTGTTACTTCCGAAAATCAGAAAAGCCCAAATCTGCAGTTTGAGTTCCTTTGCTACTATCTTGCCGAGCTAAGTTTGTTGGATTACAATTGTATTACATTTTTACCTTCGCTGGTGGCTGCTTCAGTCATATTTTTGGCCAACTTTACCATTCGGCCTAAGTTGCATCCCTGGGATTCAGCCCTGCAAGAATGCACGGGATATAAGCCAGACGAGTTGAAGGATTGTGTGATGATCTTACACGACTTGTACTTGGCAAGAAGGGGAGGATCCTTGCAAGCTATACGGGAGAAATACAAACAGCACAAGTTTAAATACGTGGCAATGCTGCCTTCTTCTCCGGAGATACCGATTTCTTACTTTGAAGAAGCATAA 1119 0.4549 METRAAKRRAEAATLAQNRSPKRKRVVLGELPNLSNLIEPGTSNPELEPQKPKYRRNTRVKKAATTKSSFSSGDPKSDDAKAVRTDAKSGTDVILDDLQSSEAYVPDIYKYLRKMEVEPKRRPMPDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSTKLVTRQKLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLDFEMGSPTVKTFLRRFTGVTSENQKSPNLQFEFLCYYLAELSLLDYNCITFLPSLVAASVIFLANFTIRPKLHPWDSALQECTGYKPDELKDCVMILHDLYLARRGGSLQAIREKYKQHKFKYVAMLPSSPEIPISYFEEA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0825 372 Gene3D - 107 357 - -
Lele01g0825 372 CDD CYCLIN 238 329 IPR013763 -
Lele01g0825 372 CDD CYCLIN 139 228 IPR013763 -
Lele01g0825 372 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Lele01g0825 372 SUPERFAMILY Cyclin-like 238 361 IPR036915 -
Lele01g0825 372 MobiDBLite consensus disorder prediction 1 84 - -
Lele01g0825 372 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Lele01g0825 372 SMART Cyclin_C_2 238 361 IPR004367 -
Lele01g0825 372 Gene3D - 123 236 - -
Lele01g0825 372 FunFam Cyclin A1 225 357 - -
Lele01g0825 372 FunFam Mitotic cyclin 6 123 223 - -
Lele01g0825 372 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Lele01g0825 372 Pfam Cyclin, C-terminal domain 238 360 IPR004367 -
Lele01g0825 372 PANTHER CYCLINS 78 349 IPR039361 -
Lele01g0825 372 PIRSF Cyclin_A_B_D_E 1 367 IPR039361 -
Lele01g0825 372 SMART cyclin_7 242 330 IPR013763 -
Lele01g0825 372 SMART cyclin_7 145 229 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0825 Lele-ChrLele01 4772397 4774330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0825 5 372 Core Cell Cycle Gene Families AT1G47210 57.337 1.01e-147 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0825 01 4772397 4774330 Lele01g0825 01 4772397 4774330 ECH
Lele01g0825 01 4772397 4774330 Lele03g0814 03 4777159 4779105 hybridization
Lele01g0825 01 4772397 4774330 Lele04g0818 04 5012795 5015022 hybridization