Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0793 ATGGGGGGCCATGAAAACACCATGGGGTTTCAACACAGAAACGAAAGTATTCTGAGTCGTCCAGTTTCTGGTTTGGGCACCACCAATGTTTCAGATTTAAGCAATCCTTTTCTTGGTCCATCTGCTTGGGATCCACTTTTTTCATTGAGTCAGACTCATCAAAGCTTTGGAGGATCATCATTGGTTTCTCATAGTGACTTTGCCAAATCTTCATACTCAAGTGTCCTAGAAAATCAGGGAATGAGTGGCTCCTCTCACTTTGTTCACTATATGTCTGACTCAAATTTTGCTGATATGATCCCAAAGATCGCTTCCTGTGGAAATGGTGATATAGTAAATGCGGCAGGATATGCGTCAAGTTATGATCCAAATAAGGAAGAACAATTGCAGGGTGAGCATTCCACTCCTGAAGAAGAAGGAGCCACTTCTTCACCTATTGGAAATAGAAGAAAACGAGGGCTTGATCAAAATCCTGCGTTCAATCCAAGTAAGAGCGCTGAAGGGGAAGCACTTGAGGGTTCATCAGGGAAAAGCCCAGATGGCGGGAAAGAACATGATGACAAGAAGCCAAAATTTGATCAAAATATAAGTGCAGATTTGCGTGGTAAGCAATCAGTTAAGCAAGCTAAAGACAACTCTCAGAGTGGAGAAGCTCCCAAAGATAATAATTTCATCCATGTGAGAGCTCGAAGAGGTCAAGCTACAAATAGTCATAGCCTTGCGGAAAGGATAAGAAGAGAAAAGATAAGTGAGAGAATGAAGTTACTTCAAGAACTTGTTCCTGGATGCAACAAGATAACTGGCAAAGCAGTCATGCTTGATGAGATTATTAACTATGTGCAATCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCTACCGTGAATCCTGAGATGAATCTGGATGTAGAGTGGATCCTATCCAAAGATATTCTGCACTCACGCATTGGACATGGAGCTATTGGTGGATATGGAGGTGGTATGATCAACTCAAATCACCTATTTGCCGGTGGATGTTTTCAGGGGACCCTTGGAAGCATGCCAAGCGCATCATCACCGAATATCCCTCCTTTGCCTCAGAGTGTTATGGATCATGAACTCCAGAGCATATATGGAATGGGATACGAGTCTAATTCAGCGCTTCAAAATTTGGGACCACAAACAGGGCGGTAG 1179 0.4283 MGGHENTMGFQHRNESILSRPVSGLGTTNVSDLSNPFLGPSAWDPLFSLSQTHQSFGGSSLVSHSDFAKSSYSSVLENQGMSGSSHFVHYMSDSNFADMIPKIASCGNGDIVNAAGYASSYDPNKEEQLQGEHSTPEEEGATSSPIGNRRKRGLDQNPAFNPSKSAEGEALEGSSGKSPDGGKEHDDKKPKFDQNISADLRGKQSVKQAKDNSQSGEAPKDNNFIHVRARRGQATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEMNLDVEWILSKDILHSRIGHGAIGGYGGGMINSNHLFAGGCFQGTLGSMPSASSPNIPPLPQSVMDHELQSIYGMGYESNSALQNLGPQTGR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0793 392 Gene3D - 230 304 IPR036638 GO:0046983
Lele01g0793 392 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 128 350 IPR024097 GO:0006355
Lele01g0793 392 MobiDBLite consensus disorder prediction 122 240 - -
Lele01g0793 392 MobiDBLite consensus disorder prediction 178 196 - -
Lele01g0793 392 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 233 283 IPR011598 GO:0046983
Lele01g0793 392 MobiDBLite consensus disorder prediction 198 220 - -
Lele01g0793 392 CDD bHLH_AtBPE_like 223 306 - -
Lele01g0793 392 Pfam Helix-loop-helix DNA-binding domain 236 284 IPR011598 GO:0046983
Lele01g0793 392 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 231 301 IPR036638 GO:0046983
Lele01g0793 392 SMART finulus 239 289 IPR011598 GO:0046983
Lele01g0793 392 FunFam Basic helix-loop-helix transcription factor 230 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0793 Lele-ChrLele01 4593803 4595922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0793 1 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.481 2.55e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele01g0793 HLH 7.8e-07 No_clan