Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0788 ATGGGGAGAGCTCCTTGCTGCGACAAAGCGAACGTGAAGAGAGGCCCTTGGTCCCCAGAAGAAGATGCCAAGCTCAAGTCCTATATCGAACAACACGGCACCGGCGGTAACTGGATCGCTTTGCCCCAAAAGATCGGGCTAAAGAGATGCGGCAAGAGTTGTCGTCTAAGGTGGTTGAACTACCTTCGCCCCAATATCAAGCACGGGGGTTTCTCCGAAGAAGAAGACAACATCATATGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCTGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAACGATATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTTCTGGGAAAACACCGTAAAGAACAACAGGCACGTGGTAGGGACAAGAGTAAGCAAGGAGCGGATAAGAGTATTGTTGGGAATTCATGGATCCTTCCCGAAAATAGTCAGCTTCAGGTTCAGGTTCAGGCTCAACAGCACCCGTATTGGACTCACCCCAAGATGATGTCTCTGCTACCACCCTTGCCATACTACCAAGTCCCAGGTTTCAACGACCAAGATTCCATTAGAAAACTGCTTATCAAGCTCGGAGGAACGTTTTCCGACCAGCCTGAAGAGTTCAATTTTCAATTACCAGATGCGACTCCCTCTGTACAGTCACCAATTTATCAAGTTTCTTCTTCTGCTTCTGCTTCTGCAAGCGCTATGAACAATAACCAACTACAATTCCCTCAACTCCATTACCACTCTGGACTTAACTTGGTGCAGGGAAGCAGCGCTTTCACCCAAGCACATGAGGAAATGTCGGTATCTTATCCACCTAATAGCTTAGATGGGCTGGAATACTTGATCAATCATGATCATAAGATAGACCTTACCAGCTTGTGTGACAACAACACCGTAGTTTGTCCTCTACTTTCTTCCGATTATGAATGTATGCCACCACCTCAGGAATTTGCTTATCAGGAGTTGAGTAAACCACAATTACCTACGAGAGATCTAAAGAACGAGTATCACATGGTAGGGAATGTTCAAGGAGCTCGCCTAGCTAAAGCTGGACATGTCGTCATGTATTGGATGTATCTGAGACAATCAACATTGTTGTTAAGATGCATGCCTACTATATTTGACCCAGAACTGGCCCATTTGCTCGGTCCCACCATTGTCTGTCTGCTAAACCCTAGAGGAAGGAAGCATGGATGGGTGCCAGAGGTTGAAGATATTGCTAGTCGCGAGTCTACTGTTGAATCCTTCGTGTCGATGGCGCTTCTGCCTTCGCTTCCAATTTCTTCAACTCCAAAGTTTTGGATTAAGTTGTTTCTTGGCCAACCACGTCAACTCCCAAAGCATTCAGCAATACAACTTCCCCAGCAAACACTCCATGCCAGAACTTGTTTAATGAAGATCTCAATGGCTGATCATAATGAGCCTGATGAGGTTAAGTTGCAGATTGGAAACATGAAGGAGAAGCTTACAGAAATGTTGCCGATCTCAGTTCAGGAATTTCCTTGGACTCAAGCCGAGCATAAACTTGTAGATAGGTTGATCTCTCTTGCAAGAGAGGCGTTGAAGTGGTCCCTTGTTTTATTTTTTGTACTTAGCTCTATGTCCGACGTTGTATATACATTATTTATAAATCGTGAGCTAGTGATTCCCATAGGCCTCTTGGTTGGCTGCCTAACGGCTGACTTTTTGAAGGAGATTTCGCAGGAATTGTTTCATATCTCTGAGGACAAAGGTTTGAACCAACAAGTTTTGGGGATCTATTGCTTTTTTGTGTTTGTGAAGATCATCTCTGCATACTTTGGAATACAAGCTCGGGTTTTTCTTTTGCATGTAGCAAATGGTGGACTGATGCAGGCACTGTGGTATTGGAAAAATTCGAGGGAAGAGGCGAAGAAACAAGAGGAGGGTAGTTTTTCATCCTCTGGTTTGGAGGCTTCATGA 1956 0.4494 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQARGRDKSKQGADKSIVGNSWILPENSQLQVQVQAQQHPYWTHPKMMSLLPPLPYYQVPGFNDQDSIRKLLIKLGGTFSDQPEEFNFQLPDATPSVQSPIYQVSSSASASASAMNNNQLQFPQLHYHSGLNLVQGSSAFTQAHEEMSVSYPPNSLDGLEYLINHDHKIDLTSLCDNNTVVCPLLSSDYECMPPPQEFAYQELSKPQLPTRDLKNEYHMVGNVQGARLAKAGHVVMYWMYLRQSTLLLRCMPTIFDPELAHLLGPTIVCLLNPRGRKHGWVPEVEDIASRESTVESFVSMALLPSLPISSTPKFWIKLFLGQPRQLPKHSAIQLPQQTLHARTCLMKISMADHNEPDEVKLQIGNMKEKLTEMLPISVQEFPWTQAEHKLVDRLISLAREALKWSLVLFFVLSSMSDVVYTLFINRELVIPIGLLVGCLTADFLKEISQELFHISEDKGLNQQVLGIYCFFVFVKIISAYFGIQARVFLLHVANGGLMQALWYWKNSREEAKKQEEGSFSSSGLEAS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0788 651 CDD SANT 71 113 IPR001005 -
Lele01g0788 651 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele01g0788 651 FunFam Transcription factor RAX3 7 68 - -
Lele01g0788 651 CDD SANT 16 62 IPR001005 -
Lele01g0788 651 Gene3D - 7 68 - -
Lele01g0788 651 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele01g0788 651 MobiDBLite consensus disorder prediction 119 138 - -
Lele01g0788 651 SMART sant 13 64 IPR001005 -
Lele01g0788 651 SMART sant 67 115 IPR001005 -
Lele01g0788 651 Gene3D - 70 141 - -
Lele01g0788 651 PANTHER OS09G0431300 PROTEIN 1 242 - -
Lele01g0788 651 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele01g0788 651 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele01g0788 651 FunFam Transcription factor RAX3 70 142 - -
Lele01g0788 651 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele01g0788 651 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele01g0788 651 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0788 Lele-ChrLele01 4563024 4569330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0788 1 209 MYB Transcription Factor Family AT3G49690 61.395 4.14e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele01g0788 Myb_DNA-binding 4.2e-14 CL0123