Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0787 ATGGAGGAATATAGTAACCAGGCGAGCGAAAGCACAGGTTCAAGGCCTAATTTCTTGAACTCGTTCGCTACAGTTGGAGGTTCAAGTGTGGGAAACCATCATCAGTCGCCCAGCACTAACTTTCATCTTCAGTCAGGTGGATCGGAGTTCTATCAATCTTTGAAAACTGAAGCCAACACCTCCATTAATCACTCTCAGATTTTCCACTATCCTTTGATCAGGCAAAGCATTCAGACTCGTGGAGGAAGCCAAACCTCTGACGAAGTTGAATCTCTTAAAGATAAAATCATTGCTCATCCTCACTATTCCAACCTCTTGGAAGCTTACATGAACTGCCACAAGGTAGGAGCTCCGCCGGAAGTGGTGGCGCGTCTGACAACGGCAAGGCAAGAGTTCGATGCACGACAGCGATCTTCGGTCAGATCCAGGGAAATTTGCAAGGACCCAGAACTTGACCGATTTATGGAAGCTTACTATGACATGCTCGTGAAATACGGGGACGAATTAACAAGGCCAGTTCAAGAGGCAATGGATTTCATACACAACATTGAAGCTCAGCTCAACGTGCTTTGTAATGGACCTGTGCGCATCTGCCCTGAAGATAAGGGCAATGGCGTGGATTCATCTGAAGAAGATCAAGATAACAGTGGAGGAGAAGCAGAAATGGCCGGAATTGATCCTCGAGCCGAAGATCGCGAGCTTAAGAACTACTTGCTTAGAAAGTATAGTGGATACTTGGGTAGCCTGAAGCAAGAACTTTCAAAGAAAAAGAAGAAAGGAAAACTGCCTAAAGATGCAAGGCAAAAGCTTCTTAACTGGTGGGAATTACACTATAAATGGCCCTATCCGTCGAAGGTGGCATTGGCAGAATCAACAGGGTTGGACCAGAAGCAAATAAACAACTGGTTCATAAATCAAAGGAAACGGCACTGGAAGCCATCAGAAGACATGCAATTTATGGTGATGGAAGGCCTTCACCAACAGAATCCAGCTCTCTATATGGACGCCGACTACATGGCTGATGCTCACTACCAAGGCGAAATTCGTGATTTGGAGATTAATCTGGACGATGGGGAAGCTGAAGTGGAGTGGCATGGCCTAGGATTTGTACTGATGCCGACCGATTTCATGTATGTAGCCAAGAGGCGCAGTGAGGACCACAACTTCGGACGAGGACAACTTAGTCTTTTCGGGAACTTTCAAGTGAACCCCGCTGCCGGAGTTCTAAACTACGGTCAAGTTCCTTCACCGACGAAGGGATCGTTGTACCTTAGGCCTCTGCTCATAGGGACGGGTCCTGTCTTGGGTTTGGCCCCAGCACCTGAGTATACCTTCCTCATTTATGCTTCTCCTGTCGGCAACTATTTCAAAGTGCTGATGGCACAAACGAGGGCAAAAAACAGAGGATTTTCTGATGTGCTGTACTTGGACTCGCAGACTAAGAAAAATCTAGAGGAAGTGTCTTCTTGTAACGTTTTTATTGCAAAGGATGGAGTACAAAACAGGCAATGGCACCATTTGTCAGAAGCTGGCCTTAACCCTCACGGGTATTCAAACTGTTCCGATGACAACAATGACAATGGAAACGGTGACCTTGAAGAAGATAAGAAGATGATGACGCCTTGCGAGAAAGTCGTATTATGCCAAGCTCTTCAACCCACTGCTGAGAGGGAAGGGAATGTCGGGAGAGGACGGGGTTTTCTTGGTGAAGATGGCGGGAAAAAGATAGAAGGAGAGGAGGCAGCGACTAAATCCTAA 1758 0.4664 MEEYSNQASESTGSRPNFLNSFATVGGSSVGNHHQSPSTNFHLQSGGSEFYQSLKTEANTSINHSQIFHYPLIRQSIQTRGGSQTSDEVESLKDKIIAHPHYSNLLEAYMNCHKVGAPPEVVARLTTARQEFDARQRSSVRSREICKDPELDRFMEAYYDMLVKYGDELTRPVQEAMDFIHNIEAQLNVLCNGPVRICPEDKGNGVDSSEEDQDNSGGEAEMAGIDPRAEDRELKNYLLRKYSGYLGSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMEGLHQQNPALYMDADYMADAHYQGEIRDLEINLDDGEAEVEWHGLGFVLMPTDFMYVAKRRSEDHNFGRGQLSLFGNFQVNPAAGVLNYGQVPSPTKGSLYLRPLLIGTGPVLGLAPAPEYTFLIYASPVGNYFKVLMAQTRAKNRGFSDVLYLDSQTKKNLEEVSSCNVFIAKDGVQNRQWHHLSEAGLNPHGYSNCSDDNNDNGNGDLEEDKKMMTPCEKVVLCQALQPTAEREGNVGRGRGFLGEDGGKKIEGEEAATKS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0787 585 CDD homeodomain 265 314 IPR001356 GO:0003677
Lele01g0787 585 SMART KNOX2_2 141 192 IPR005541 GO:0003677|GO:0005634
Lele01g0787 585 SMART HOX_1 255 317 IPR001356 GO:0003677
Lele01g0787 585 Pfam Homeobox KN domain 273 309 IPR008422 GO:0003677|GO:0006355
Lele01g0787 585 Gene3D - 414 457 IPR043131 -
Lele01g0787 585 Gene3D - 258 317 - -
Lele01g0787 585 MobiDBLite consensus disorder prediction 568 585 - -
Lele01g0787 585 ProSiteProfiles ELK domain profile. 233 253 IPR005539 GO:0003677
Lele01g0787 585 Gene3D - 458 498 IPR043132 -
Lele01g0787 585 MobiDBLite consensus disorder prediction 1 20 - -
Lele01g0787 585 Gene3D - 356 413 IPR043131 -
Lele01g0787 585 PANTHER AMINO ACID AMINOTRANSFERASE 356 413 IPR005786 GO:0004084|GO:0009081
Lele01g0787 585 Pfam ELK domain 233 254 IPR005539 GO:0003677
Lele01g0787 585 Pfam KNOX2 domain 145 191 IPR005541 GO:0003677|GO:0005634
Lele01g0787 585 SMART ELK_2 233 254 IPR005539 GO:0003677
Lele01g0787 585 ProSitePatterns 'Homeobox' domain signature. 288 311 IPR017970 GO:0000981|GO:0006355
Lele01g0787 585 MobiDBLite consensus disorder prediction 558 585 - -
Lele01g0787 585 MobiDBLite consensus disorder prediction 515 535 - -
Lele01g0787 585 MobiDBLite consensus disorder prediction 201 226 - -
Lele01g0787 585 SUPERFAMILY Homeodomain-like 254 322 IPR009057 -
Lele01g0787 585 SMART KNOX1_2 90 134 IPR005540 GO:0003677|GO:0005634
Lele01g0787 585 Pfam KNOX1 domain 92 133 IPR005540 GO:0003677|GO:0005634
Lele01g0787 585 ProSiteProfiles 'Homeobox' domain profile. 253 313 IPR001356 GO:0003677
Lele01g0787 585 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 352 498 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0787 Lele-ChrLele01 4549398 4557819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0787 53 345 Homeobox Transcription Factor Family AT4G08150 64.052 7.48e-123 366