Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0786 ATGATCCGAGAACCAACCCCCTTCGTCCTCCCTCATCTTCAACTTCCTCCTTGGCTATCTGATAATTCCCCGGTAGCCACCCCACCTTCCCCCTCTTCATTCCCCGTCCCAATCAACACCGATGCCGGCGCCGCCGACTCCTCCGTCCTCCTCCTCCACCCTCTTCTTTCCAACGATTGTACCCTCCAGGAACTGCACTCTCTCGCTCGCGACTTCGACGTGCCCGTTGATGCTTTCTCCAACGATCAGTTCCGCATGTTCGAGTTCAAGATCCGCAAGTGTCCACGTGGCGGAAGGTCTCATGACTGGACCCGCTGTCCCTTTGCCCATCCCGGCGAGAAGGCTCGCCGCAGGGACCCTCGCAAATTCCCCTACTCCGCCACCCCTTGCCCTGACTTCCGCCATGCAAATTGCAGCAGAGGTGACTCCTGCGATTTCGCTCACGGAGTCTTCGAATGCTGGCTCCATCCTTCTCGCTATAGAACTCAACTCTGCAAAGATGCCACCAATTGTCGCCGTCGAGTCTGTTTCTTTGCCCACACTCCCGATCAATTGCGTGTCCTCACTCGCGGCTCCACCGAAGCATCAGTCGGGTCGCCGATTCGTCGCTCTCTGGATTCATCGAGGAGCAGCTCTTCATTTATCTCGTCACCAACTTCAGTCCTCACATCATCGCTACCTGACGGCTCACACTTGTCGCCGAGCAATTCCCAATATGGCGGTAACACATACAATGCGATGAGTGAAATAGTAACTTCAATGCGCAATATTCAGCTTGATTCAAACCGGATGGTTTCTGGTTTTGGTTCTCCCCGTGGATCGATTCTCCGACCTGAGTTTTCCAGCCTTCAGTCGACCCCAACGTGGGCAAGAACTGATAAGTCCGGACCCGGTTCAGCGGACCTCTGGGATAGTAGCCACGAAGAAGAGACTCCCACGGAGAGGGTAGAATCAGGAAGAGACCTCAGGGCCAAAATCAATGTCAAATTCAGCAATGGAAACTCATACGGGCAAAGCGACGCGCCTCTATCGGCTCCTGATTTTGGATGGGTGTCCGAACTGGTGAAGTGA 1071 0.5472 MIREPTPFVLPHLQLPPWLSDNSPVATPPSPSSFPVPINTDAGAADSSVLLLHPLLSNDCTLQELHSLARDFDVPVDAFSNDQFRMFEFKIRKCPRGGRSHDWTRCPFAHPGEKARRRDPRKFPYSATPCPDFRHANCSRGDSCDFAHGVFECWLHPSRYRTQLCKDATNCRRRVCFFAHTPDQLRVLTRGSTEASVGSPIRRSLDSSRSSSSFISSPTSVLTSSLPDGSHLSPSNSQYGGNTYNAMSEIVTSMRNIQLDSNRMVSGFGSPRGSILRPEFSSLQSTPTWARTDKSGPGSADLWDSSHEEETPTERVESGRDLRAKINVKFSNGNSYGQSDAPLSAPDFGWVSELVK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0786 356 MobiDBLite consensus disorder prediction 277 293 - -
Lele01g0786 356 Gene3D - 124 187 - -
Lele01g0786 356 ProSiteProfiles Zinc finger C3H1-type profile. 124 151 IPR000571 GO:0046872
Lele01g0786 356 MobiDBLite consensus disorder prediction 303 320 - -
Lele01g0786 356 PANTHER UNKEMPT FAMILY MEMBER 74 356 IPR045234 -
Lele01g0786 356 MobiDBLite consensus disorder prediction 276 320 - -
Lele01g0786 356 SMART c3hfinal6 159 182 IPR000571 GO:0046872
Lele01g0786 356 SMART c3hfinal6 124 150 IPR000571 GO:0046872
Lele01g0786 356 MobiDBLite consensus disorder prediction 191 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0786 Lele-ChrLele01 4540847 4541917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0786 73 188 C2H2 Transcription Factor Family AT5G12850 64.655 3.39e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele01g0786 None None None