Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0772 ATGGGAAAAGATACGTTGATTGCTCCAGAGGAGATGGCTGGTCAAGGTTCAAGTGTCATTAATGAAACTCCACAAAATCCAATGCCCAACTCACTCATTCAGTGCTATTCATTGAACCTCAATGATCAAACCTGTACGATAGATGGAATATCAATGCTTTCTGGTTCTGATGTTCATGGCCCATCTGTAAGCAATGTGATAAATCCTGAAAGTATTGGTTCTAATGCATTTCTTTCATCGCAAGGAAAGAACATTTTTGGATATGCCTCACTTGGAACTTCATGTCCCATAAATAACGATGAGTTTCAAGGGCAAACAGCTACCCCTGTTTCACTTGCTGGCATTCTTGCTGCTAGAATTGGTCTTCAAGAAAATTTAGAGAAATCACACGTTTTATCTCCTTCATTCAGTTCATTGGACTCATTGGGACCTTATATGTTAAACAATTGGCCTTATACTCCAAGCCAGTTGCATTTAACTTCCGGATACCACGGCTGCAACAATCATATGCCTGATGCAAACTTGGATTCAAATGGATGGGCTTCATCAAATGTTTATGGTTCGTCTAATTTTAGTAATGAACCTGTATTGAGTCTTGCAACATGTCCAACCACAGGCCAGTTCTCAGAGGTGAGTTGTTCTGATGAAGTTGTCCGTTGCTTCAGTAAAACAAGGTCAAGTTTGGAACATGCCTCTTGCAGCAACAGGGAGCTTGCCATGAGTTTGAACTCTGGCAGACACTTTCATTTCTCGCAAGCAATGTTAGGGTCAAGATATCTCACTGGAGTTCAAGAGATACTCGCTCAACTTGCAAGATTTTCACTTCAGAATCTTGAACAGATGAGATATTCACAAGCAAATTCTATGTTCAAACCCCACATGGAAGCTCCATTGCAAAGACATGCAGCTGCATCAAACAAATCCCAGCTTCTGACACTCTTAGAACTGGTGGACAACCGATATAATAGATGTTTGGATGAGGTTCATACTGTTGTGTCTGCATTCCATGCGTCTGCAGAGTTGGACCCACGCGTTCATGCTCATTTTGCTCTTCAAACAATCTCTCTCTTATACAAGAACTTGCGAGAGAGAATTAGTAATCACATTCTTGCCATGGGGCCTGATTTTGACAGTTTATGCACAGTGGGCAAGGAAAGATCTATTGAAACTTCACTCATCCATGACCAATTGTCTCTGCAACAGTTGAAACGAAAGGATCATCAATTATGGAGGCCCCAAAGGGGCTTGCCAGAGAACTCTGTTTCAGTCTTACGAGCCTGGATGTTTCAGAACTTTCTCCATCCGTATCCTAAAGATTCAGAGAAACATTTACTTGCATTAAAAACTGGGTTGACGAGAAGCCAGGTCTCAAACTGGTTTATAAATGCTCGTGTTCGGCTATGGAAACCCATGATTGAGGAAATGTACGCTGAACTGGATACTAAAAGAAAGGCTAGTTGA 1461 0.4148 MGKDTLIAPEEMAGQGSSVINETPQNPMPNSLIQCYSLNLNDQTCTIDGISMLSGSDVHGPSVSNVINPESIGSNAFLSSQGKNIFGYASLGTSCPINNDEFQGQTATPVSLAGILAARIGLQENLEKSHVLSPSFSSLDSLGPYMLNNWPYTPSQLHLTSGYHGCNNHMPDANLDSNGWASSNVYGSSNFSNEPVLSLATCPTTGQFSEVSCSDEVVRCFSKTRSSLEHASCSNRELAMSLNSGRHFHFSQAMLGSRYLTGVQEILAQLARFSLQNLEQMRYSQANSMFKPHMEAPLQRHAAASNKSQLLTLLELVDNRYNRCLDEVHTVVSAFHASAELDPRVHAHFALQTISLLYKNLRERISNHILAMGPDFDSLCTVGKERSIETSLIHDQLSLQQLKRKDHQLWRPQRGLPENSVSVLRAWMFQNFLHPYPKDSEKHLLALKTGLTRSQVSNWFINARVRLWKPMIEEMYAELDTKRKAS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0772 486 SUPERFAMILY Homeodomain-like 411 479 IPR009057 -
Lele01g0772 486 MobiDBLite consensus disorder prediction 1 24 - -
Lele01g0772 486 Pfam Homeobox KN domain 427 466 IPR008422 GO:0003677|GO:0006355
Lele01g0772 486 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 183 479 - -
Lele01g0772 486 SMART prehox3 248 367 IPR006563 -
Lele01g0772 486 ProSiteProfiles 'Homeobox' domain profile. 407 470 IPR001356 GO:0003677
Lele01g0772 486 Pfam Associated with HOX 255 366 IPR006563 -
Lele01g0772 486 Gene3D - 405 484 - -
Lele01g0772 486 CDD homeodomain 410 471 IPR001356 GO:0003677
Lele01g0772 486 SMART HOX_1 410 474 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0772 Lele-ChrLele01 4475888 4477650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0772 193 483 Homeobox Transcription Factor Family AT4G32980 53.205 1.66e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele01g0772 POX 1.6e-21 No_clan