Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0771 ATGGCCTCAGAAGAACAGCTTCATGGTCTAACTGAAGCAGAATTTGCAGTACTTGAGCCCATCATCAACAAATATCACAAATTCGAAGCTCTTCCCAACACATGCACTTCTATCATAACACACCGAATCCAGGCTCCGGCTAAAACTGTGTGGGGTTTCATTCGGAGCTTCGAGAATCCTCAGAAATACAAGCACTTCGTCAAGAGCTGCAACATGAAAGGTGACGGTGGCGTTGGCAGCATCCGAGAGGTCACAGTGGTTTCCGGCCTCCCAGCTTCCACCAGCACCGAGAGGCTCGAGATCTTAGACGAGGACAACCACATACTCAGCTTTAGGGTTGTGGGTGGCGAGCACCGACTCAAAGATTATCGCTCCGTCACGTCGGCGAATGAGTTTCAGACGGAAGACGGTAAGGTTTACACGATCGTGGTGGAGTCATATATCGTGGACATACCGCCGGGGAATACTGCAGAAGATACGAAGATGTTCGTGGACACTGTAGTGAACCTCAACCTTCAGAAACTTGACCTCCTTGCCATCTCAACCCTCCATGCACAACATTAG 564 0.4982 MASEEQLHGLTEAEFAVLEPIINKYHKFEALPNTCTSIITHRIQAPAKTVWGFIRSFENPQKYKHFVKSCNMKGDGGVGSIREVTVVSGLPASTSTERLEILDEDNHILSFRVVGGEHRLKDYRSVTSANEFQTEDGKVYTIVVESYIVDIPPGNTAEDTKMFVDTVVNLNLQKLDLLAISTLHAQH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0771 187 Gene3D - 1 187 IPR023393 -
Lele01g0771 187 CDD PYR_PYL_RCAR_like 35 175 - -
Lele01g0771 187 SUPERFAMILY Bet v1-like 35 176 - -
Lele01g0771 187 Pfam Polyketide cyclase / dehydrase and lipid transport 41 161 IPR019587 -
Lele01g0771 187 PANTHER - 34 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0771 Lele-ChrLele01 4470160 4470723 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0773 25 4928598 4929164 Lele01g0771 01 4470160 4470723 CCT
Lele27g1302 27 19756286 19756960 Lele01g0771 01 4470160 4470723 CCT
Lele01g0771 01 4470160 4470723 Lele25g0759 25 4814700 4817690 CCT
Lele01g0771 01 4470160 4470723 Lele26g0766 26 4879254 4882157 CCT
Lele01g0771 01 4470160 4470723 Lele27g1316 27 19869704 19872662 CCT
Lele01g0771 01 4470160 4470723 Lele28g0754 28 4801227 4804138 CCT
Lele01g0771 01 4470160 4470723 Lele01g0771 01 4470160 4470723 ECH
Lele01g0771 01 4470160 4470723 Lele03g0765 03 4464878 4468351 hybridization
Lele01g0771 01 4470160 4470723 Lele04g0766 04 4663881 4664444 hybridization