Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0766 ATGAAGCATCTACTCAGAAAACTTCATATCGGTGGTGGTATAAGTGATCACCAGAGATTATCGCCTGAGTCTCGCCCTGTGCTCAGCCCCACTCCCAATCTTACTTTATCCTCTTCTGCTTTGCCCTCCCCTACAATGCCTACCGTCACTGCAACTGAATCGGTTGATGATCGTACGGCTGATGATGTTACCGCTGGCGTTGGTGGCAACAAGGGAGGGGATTTCAATCTCATGGAGGAGGAGTTTCAGATGCAGTTGGCTTTGGCAATTAGTGCTTCTGATTCTGATGTCTGTAAGGACCCCGATTCTGTTCAGATCGATGCTGCCAAGCAGATGAGCCTCGGGTGTCAAACTCCCGTCACTGACACGGACGCCCTCGTCCAGTTTCAATCTCTTCGTTATTGGAACTACAGTGTCATTGATCACGAAGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGCATCACCTCAAATTCAGCTGAACGAGGAAGGATGCCATTGTTGGTTGATCTTCAAACTACATCCATCTCAGAAAATCTTGATTATGAAGTGATCTTGGTGAACCGCATGGTTGATAGTGAGCTGAAACAGCTTGAGAAAAAGGCCTATAAATTATCCAAGAACTCCCACTTTTCTGAACAAGGACTAATCTTAAGCGGCCTGCTTCAGAAACTTTCTGACATTGTCGTTAATAGAATGGGTGGGCCGGTTGGTGATGCTGATGAAATTTTGAAAAGGTGGACCGTGAGGAGCTGTGAGTTAAGAAATTCCTTAAGAACCATTATTCTTCCCATTGGCTGTCTTGATGTAGGACTTTCACGTCACCGTGCCCTACTTTTCAAGGTACTTGCAGATAGAATTAATGTTCCCTGTATGCTGATCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCCGTGAATTTGATCAAAGCTGATGATGGAAGTGAATTCATCATTGATCTGATGGGTGCTCCTGGGGCTTTTAATAACACTGAATTGGATAAGGATTATACTGTAGTTCAATTAAATGAAACAGCTAATGGAGATCACACTAAATATGATGGTCCAAGTGAGAAAGTGAATGCAGTTCTAGGGGAGGGCACAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGCATTGGTATTGGTTCTTATGGGGAGGTCTATCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCGGGCGATGCATTGACTCAGTTTAAATCTGAAGTTGAGATCATGTTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCCCCACATTTCTCTATCTTGACGGAGTTTCTTCCTAGAGGAAGTTTATATAGGCTATTACATCGACCCAATTTTCAACTTGAAGAGAAGAGGCGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCATACGAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCGAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCACGCATGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGCTACCACAAAGATCCCATGGAAGGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAGACGGCTTGAAATTCCAGAAGATATTGATCCAGTAGTGGCACAAATTATATGTGATTGCTGGCAAACGGAGCCACACTTGCGACCATCATTCTCACAGATTATGTCTCGTCTCCGCCACCTTCGCTGCCTGGTTGTCAGAACAACAGAACCAACTGAAAATTAA 1944 0.4408 MKHLLRKLHIGGGISDHQRLSPESRPVLSPTPNLTLSSSALPSPTMPTVTATESVDDRTADDVTAGVGGNKGGDFNLMEEEFQMQLALAISASDSDVCKDPDSVQIDAAKQMSLGCQTPVTDTDALVQFQSLRYWNYSVIDHEEKVMDGFYDVYGITSNSAERGRMPLLVDLQTTSISENLDYEVILVNRMVDSELKQLEKKAYKLSKNSHFSEQGLILSGLLQKLSDIVVNRMGGPVGDADEILKRWTVRSCELRNSLRTIILPIGCLDVGLSRHRALLFKVLADRINVPCMLIKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGAFNNTELDKDYTVVQLNETANGDHTKYDGPSEKVNAVLGEGTEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALTQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFQLEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTKIPWKGLNPMQVVGAVGFQNRRLEIPEDIDPVVAQIICDCWQTEPHLRPSFSQIMSRLRHLRCLVVRTTEPTEN 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0766 647 FunFam Serine/threonine-protein kinase isoform 1 370 457 - -
Lele01g0766 647 CDD STKc_MAP3K-like 385 631 - -
Lele01g0766 647 PRINTS Tyrosine kinase catalytic domain signature 453 466 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 PRINTS Tyrosine kinase catalytic domain signature 558 580 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 PRINTS Tyrosine kinase catalytic domain signature 539 549 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 PRINTS Tyrosine kinase catalytic domain signature 492 510 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 PRINTS Tyrosine kinase catalytic domain signature 602 624 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 ProSiteProfiles Protein kinase domain profile. 379 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0766 647 Pfam Ethylene-responsive protein kinase Le-CTR1 128 329 - -
Lele01g0766 647 Gene3D Phosphorylase Kinase; domain 1 372 456 - -
Lele01g0766 647 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Lele01g0766 647 SUPERFAMILY Protein kinase-like (PK-like) 368 631 IPR011009 -
Lele01g0766 647 MobiDBLite consensus disorder prediction 14 51 - -
Lele01g0766 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Lele01g0766 647 Gene3D Transferase(Phosphotransferase) domain 1 458 639 - -
Lele01g0766 647 MobiDBLite consensus disorder prediction 22 51 - -
Lele01g0766 647 FunFam Serine/threonine-protein kinase CTR1 458 641 - -
Lele01g0766 647 Pfam Protein tyrosine and serine/threonine kinase 379 631 IPR001245 GO:0004672|GO:0006468
Lele01g0766 647 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 640 - -
Lele01g0766 647 SMART serkin_6 379 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0766 Lele-ChrLele01 4444015 4451275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0766 347 639 MAP Kinase Kinase Kinase AT5G11850 82.594 9.52e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele01g0766 PK_Tyr_Ser-Thr 2.4e-65 CL0016