Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0765 ATGACGCCTGTTTATCTGAACCAACCGGCTCATTCTCTCCCTCTCGCCGATCACCAACAAGAAGGAGATAAAAACCATCTCTTCATCAGTTCTCCTACTAACCAGGATCCAACCAGTTCTGTCTCATGTCCTACTTCCTGCATATTTGATGACTCACAAGCTAGGGATATCGGAAAACAACGGCATGATCAAGAGGCAGGATCATCTTCTTTTTCACATATGTATGATTATTGGAGCACCGGTTGTGGCCCTAAATATGATGAAAAGGGCAAGGAAGGAATCAACAGAAGAAGCAGCAGCAGTCACGAGGATTCATCAGCAAAATGGATGTGTTCAGAGATGTGGTTAATGCAAAAAAACAAACCTAGCAGCAGTACGGAGTCTAATCACAAGGCATCGTCAAGTTATAATCCAACATGGCAAAACCAAAGACGTGGCTCTAATTACAGGTATAACAACGGCAATAACATCAGTAGGATTTGTTCAGATTGCAGCACAACCAGCACTCCACTTTGGAGGAGTGGCCCTAATGGTCCCAAGGTGCAGTCACTTTGCAATGCCTGCGGGATTAGGCAGAGAAAAGCAAGGAAAGCCATGGAAGAAGCTGGGTGGTGTGAAAAGACCAGAATAGGGCAGAACAAGGAGAAGAAGAGCCAGGTAATAAAGAACAAGTGGAAGGGTGGACAGTCTGAGTCTCGAGGGAAAACGAAAGTGGGTTTCCAGGAATTTGAATTCAATTTCAGGAGGAATTCAGTGTTTCAGGAACCAGTGTTCCCACGGGATGAAGTTCTCGAGGGGGCGATGCTTCTCATGGATTTATCTTGTGGTTTTTCCCCCTTTTAG 843 0.452 MTPVYLNQPAHSLPLADHQQEGDKNHLFISSPTNQDPTSSVSCPTSCIFDDSQARDIGKQRHDQEAGSSSFSHMYDYWSTGCGPKYDEKGKEGINRRSSSSHEDSSAKWMCSEMWLMQKNKPSSSTESNHKASSSYNPTWQNQRRGSNYRYNNGNNISRICSDCSTTSTPLWRSGPNGPKVQSLCNACGIRQRKARKAMEEAGWCEKTRIGQNKEKKSQVIKNKWKGGQSESRGKTKVGFQEFEFNFRRNSVFQEPVFPRDEVLEGAMLLMDLSCGFSPF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0765 280 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 277 - -
Lele01g0765 280 CDD ZnF_GATA 160 194 IPR000679 GO:0006355|GO:0043565
Lele01g0765 280 Pfam GATA zinc finger 161 197 IPR000679 GO:0006355|GO:0043565
Lele01g0765 280 SMART GATA_3 155 217 IPR000679 GO:0006355|GO:0043565
Lele01g0765 280 ProSiteProfiles GATA-type zinc finger domain profile. 155 193 IPR000679 GO:0006355|GO:0043565
Lele01g0765 280 ProSitePatterns GATA-type zinc finger domain. 161 188 IPR000679 GO:0006355|GO:0043565
Lele01g0765 280 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 155 200 - -
Lele01g0765 280 MobiDBLite consensus disorder prediction 120 146 - -
Lele01g0765 280 Gene3D - 156 235 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0765 Lele-ChrLele01 4438662 4439960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0765 106 192 C2C2-Gata Transcription Factor Family AT4G26150 49.438 7.45e-17 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele01g0765 GATA 3.4e-14 CL0167