Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0753 ATGGAGGGAGTGAGAGTAAAAGTGGAAGAAACGGTGGTATGTGGAGCTGGTTCATCATCTTCTCCTTCATCTTCTGCTTCAAGTCTTTCTCCCCGCCCCATGGAAGGGCTGCACGAGATGGGTTCTCCTCCATTTCTTATCAAGACCTTTGAAATGGTGGAAGACCCATCCACCGACTCTGTTGTTTCTTGGAGCCTTGCTCGTAATAGCTTCATTGTCTGGGACTCTTACAAGTTCTCCACCACCATTCTTCCTCGCTACTTCAAGCACAGTAACTTCTCCAGCTTCATTCGCCAGCTCAACACCTATGGATTTAGAAAAGTTGATCCTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGGCGGACAGAAGCACTTATTGAAGACAATCAAGAGAAGAAGAAATGTGTCGCAGAGTGTGCTGCAAGAACGTGGAGTCGCTTGTGTTGAACTGGGCCAATACGGATTTGAAGGCGAGCCCGACAGGACGGTTATCATGGGTGAAATCGTGAACTTGAGACAGCAACAGCAGAATTCACGGGAACAACTGATTGCGATGGAGGAAAGATTACAGTCCACAGAGAAGAAACAGCAACAGATTCTCACTTTCCTTGCCAAAGCACTGAACAACCCCACTTTCATCCAACAGTTTGGCCAGAGAAACTCCCAAAACAGAGAATTACTCGGTGTTGATATCAGGCGAAAGAGGAGACTAACTGCTAGCGCGAGTGTGGAGAATTTACAGGATGATCCTGTGACGGTGGCAGTGCCCAGTGAACCTTTGGGGGACTATTCAACAAATGAAAAAGAAGAATTGGCAACAATAGAATCTGAGATAGAGACATTTTTCTCAGCTCCTTATGATAATGAATCAAGCAGTGACAAGAAAGAGCCAGCATCAAGTTCAATTCCTACAGCTAGCGGCAGCAATCTGGGTTCAATGAGTGACGCAATATGGGAGGACTTGCTGAACGAAGACTTAGTACATGGGAATCCAGAGGAGGAAATTATATTTGGTGAGCAGTCCCAAACCGATGCTCCAGTGGAAGTTTTGGTAGCAAAGTCTGATGAGTGGGCTGAAGGTTTGGAGGACTTGGTAGATCAGTTGGGTTATCTTGGGTCCAAAACCCAGTAA 1137 0.4617 MEGVRVKVEETVVCGAGSSSSPSSSASSLSPRPMEGLHEMGSPPFLIKTFEMVEDPSTDSVVSWSLARNSFIVWDSYKFSTTILPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVSQSVLQERGVACVELGQYGFEGEPDRTVIMGEIVNLRQQQQNSREQLIAMEERLQSTEKKQQQILTFLAKALNNPTFIQQFGQRNSQNRELLGVDIRRKRRLTASASVENLQDDPVTVAVPSEPLGDYSTNEKEELATIESEIETFFSAPYDNESSSDKKEPASSSIPTASGSNLGSMSDAIWEDLLNEDLVHGNPEEEIIFGEQSQTDAPVEVLVAKSDEWAEGLEDLVDQLGYLGSKTQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0753 378 Gene3D - 38 135 IPR036388 -
Lele01g0753 378 MobiDBLite consensus disorder prediction 297 313 - -
Lele01g0753 378 Coils Coil 170 197 - -
Lele01g0753 378 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 MobiDBLite consensus disorder prediction 15 31 - -
Lele01g0753 378 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 277 IPR027725 -
Lele01g0753 378 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele01g0753 378 MobiDBLite consensus disorder prediction 287 313 - -
Lele01g0753 378 SUPERFAMILY "Winged helix" DNA-binding domain 42 134 IPR036390 -
Lele01g0753 378 FunFam Heat shock transcription factor 1 38 135 - -
Lele01g0753 378 MobiDBLite consensus disorder prediction 15 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0753 Lele-ChrLele01 4385126 4386606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0753 31 376 HSF AT2G26150 51.412 7.38e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele01g0753 HSF_DNA-bind 9.6e-31 CL0123