Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0743 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGGTGAAAACAACCCATGGTCCGCTTGACATTGAGCTATGGCCCAAGGAAACCCCCAAGGCTGTCAGGAACTTCATGCAGCTCTGCCTTGAAGGTTACTACGTTAACACCATCTTTCATCGAATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCTACTGCCACCGGCACAGGGGGTGAAAGTATTTATGGCGGTGTCTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAGCATAGAGGATTAGTTGCAATGGCAAATTCTGGGTCACCACACTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGCGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGACACTGTATACAATCTTTTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGGCCTCTAGATCCCCCAAAAATAGTATCAATTGAGGTATTATGGAACCCATTTGAGGATATTGTTCCAAGAACAACTCAACCTCAGAACCAAACTAGTACTGATACAGACAATAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTTGGAGAAGAAGCTGAAGAAGGGGAAAAGGAGCTGCCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTAATAATGAACTGGGCTCAAAGTCGACAAGAGATGTGCAGTTATCTGTAAGGGATGCATTGATCTCAAAGAAAGAAGAGTCTGAGAAAAAATCAGAAGATAATGACTTGGTCAACCTTGATGACAGTGATGATGATGATGAGGCAGACTTTGATGCTATAATGCGCAGTCAAATACTTAAAAAACGCCAAGAGTTAGGGGATTTACCACCCAAGCCAAAGTTGCGAAATGGTCACGATATCCCTAAATCCTCCAATGCTACTATAAGAAGCGTGCTCACCGCCTTCTTGTGTTTTCAAGCAGGAAGCTCAAGTCCAAGGAGCCACAATTCATCAGCAATCAGGTCGAATGCTGCAAGTGTTGATGATGATCAGCGTAGGATGGAAAAATTGTCCGTGAAGAAAAAGGGAATAGGATCTGAAGCAAGGGCTGAACGAATGGCAAATGCAGATGTAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACAGTTGCAGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTATGCCATGACTTTGATTTCTACTGTTTATCTTCCTTTTCCTTATTCTGTGTTCCATCTTCTGGCTTGTGTGCTAAACATTCATCTTTCTATGCTATCAAGAAATATTGAGATTCTTTCTATCACTATTTTTCTGATAATGACCTTATTCTGTCCCTATCCACTTTTGGGTTGGATTATGACCAGGTTCTAGCAAAACTAGAGAAATTTAAGGGTATATCGGAAAAGATCACATCCTCAACAGATGGATCTGGAGATGCAAAAGAGGAGGACTTGTCGAACTGGAAAGGAGGTAGCTTAAAATTTGCACCTGAATCCGGCAAGGATCGGATGTCACGTAACGATGACCCGAACGACTATGCTGTGGTAGACCCCCTTTTGGAGAAAGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAACAGAAGAGACGAGAGCGAGAGTGGGCTGGCAAATCCCTTGATCTTTATCGGGTGAAGAGGCAGTTCTTTACAATAGTTGAATTGAATACTCTTGAGAACGGCGAGGGAGCAAGTGGAGATTTTGGTTAG 1818 0.4202 MSTVYVLEPPTKGKVVVKTTHGPLDIELWPKETPKAVRNFMQLCLEGYYVNTIFHRIIKDFLIQGGDPTATGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANSGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKIVSIEVLWNPFEDIVPRTTQPQNQTSTDTDNKDSKKKAVKKLNLLSFGEEAEEGEKELPSVKQKIKSSHDVLNDPRLLKEAIPNNELGSKSTRDVQLSVRDALISKKEESEKKSEDNDLVNLDDSDDDDEADFDAIMRSQILKKRQELGDLPPKPKLRNGHDIPKSSNATIRSVLTAFLCFQAGSSSPRSHNSSAIRSNAASVDDDQRRMEKLSVKKKGIGSEARAERMANADVDLQLFNESEKNRQLQKQKKRRVQGREDEVCHDFDFYCLSSFSLFCVPSSGLCAKHSSFYAIKKYXDSFYHYFSDNDLILSLSTFGLDYDQVLAKLEKFKGISEKITSSTDGSGDAKEEDLSNWKGGSLKFAPESGKDRMSRNDDPNDYAVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLDLYRVKRQFFTIVELNTLENGEGASGDFG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0743 605 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 MobiDBLite consensus disorder prediction 267 292 - -
Lele01g0743 605 MobiDBLite consensus disorder prediction 307 326 - -
Lele01g0743 605 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Lele01g0743 605 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lele01g0743 605 CDD cyclophilin_CeCYP16-like 8 179 - -
Lele01g0743 605 Gene3D - 2 182 IPR029000 -
Lele01g0743 605 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 200 IPR044666 -
Lele01g0743 605 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Lele01g0743 605 MobiDBLite consensus disorder prediction 307 322 - -
Lele01g0743 605 MobiDBLite consensus disorder prediction 176 196 - -
Lele01g0743 605 SUPERFAMILY Cyclophilin-like 14 183 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0743 Lele-ChrLele01 4337232 4342245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0743 9 172 U-box Gene Family AT5G67530 49.390 2.27e-43 162