Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0738 ATGGATGTGTCCAGACTTAAGCTGATGGCAGATGCTGGATTGTTATCTAATTCAATACCTAAGGTTTCAACTGAGATAGTTGCAGATTCTGATGAGGATCGTAGTGGTGGGAATCTGGAGAACCAAGTTAGCATTACTGCAGTCTCATCACCAAAACTTGACAGGGAAGAAGAATTTCCTTTGTTGGATAGGATATCCCAAAATAAAAGCACATCAGTTGCCGGTGGTGAAGTTTTAACCCCAGAACTTGAGGATGATGATACAATATCATTGGAGGGTGATCAGATCATTGACAGCTCCTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGCATATGTGGAGAGGAGTCGGTCGGTCCTGAGGCTACTTCTGAGATAAAGACACCAAGTTCCATTGACATGGAGAAGATCATATGTGCCCAGCCTGCTGATTTAGAGGAGTCTAACGTTGAGCCAGAAAGTGTTGGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGATTCTAGAGTTGGATCTGGCCCACAGTCCTCTGCGGTAGTTCTTCAGCTGCCTCTAGAAAAAGTGTTGAGTGGAACAGTTGGTCGTAGTGTTTTCGAATTAGATTATGTCCCACTTTGGGGATTCATTTCTGTGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTGCCTCGATTTATGAAAATTCCTATTCAAATGCTAATCAGTGACAGGGTAATTGATGGAATGAGCAAGTGCTTGAGTCAGCAGACAATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGTCGTGACCGTGTCCATTTGGCTTTGACTGAGGAAATAGAATTTGTGAGAGAAGGTCTAATAAATGGAAGTATCAAGGATAGCCTTCAAAATCAGTGGAAAAAAGCCTTCACCAATTGTTTCCTAAAGGTTGATGCCGAAGTTGGAGGAAAAGCTAATTGTGAACCTGTTGCCCCAGAAACCGTTGGTTCGACTGCTGTTGTTGCTATTATTTCTGCATCTCATATCATTGTTGCAAACTGTGGTGATTCAAGAGCAGTTCTGTGCCGTGGCAAAGAACCCATGGCATTGTCAGTGGATCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACAATGGAACAGTCATCGTGTGTTTGGTGTTCTTGCGATGTCAAGGTCGATAGGTGATAGATATTTGAAGCCATGGATTATTCCCGAACCAGAAGTTATGTTTCTTCCTCGTGCGAAAGATGACGAATGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGTCAAATGAAGAGGCTTGTGACCTAGCTCGACGACGAATACTTCTGTGGCACAAGAAAAACGGCGTCTCGCTAGCCTCAGAGAAAGGAGAGGGTGCTGACCCCGCTGCTCAAGCGGCAGCAGAGTACCTATCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACCGTAATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAGACATGA 1563 0.4421 MDVSRLKLMADAGLLSNSIPKVSTEIVADSDEDRSGGNLENQVSITAVSSPKLDREEEFPLLDRISQNKSTSVAGGEVLTPELEDDDTISLEGDQIIDSSCSLSVVSENSSICGEESVGPEATSEIKTPSSIDMEKIICAQPADLEESNVEPESVGEPLAVAVSLEEDSRVGSGPQSSAVVLQLPLEKVLSGTVGRSVFELDYVPLWGFISVCGRRPEMEDAVATVPRFMKIPIQMLISDRVIDGMSKCLSQQTIHFFGVYDGHGGSQVANYCRDRVHLALTEEIEFVREGLINGSIKDSLQNQWKKAFTNCFLKVDAEVGGKANCEPVAPETVGSTAVVAIISASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNSHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNGVSLASEKGEGADPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0738 520 CDD PP2Cc 211 510 IPR001932 -
Lele01g0738 520 PANTHER PROTEIN PHOSPHATASE 148 510 - -
Lele01g0738 520 SMART PP2C_4 196 508 IPR001932 -
Lele01g0738 520 ProSitePatterns PPM-type phosphatase domain signature. 257 265 IPR000222 GO:0043169
Lele01g0738 520 Gene3D - 193 520 IPR036457 -
Lele01g0738 520 FunFam Protein phosphatase 2C 16 194 520 - -
Lele01g0738 520 Pfam Protein phosphatase 2C 236 503 IPR001932 -
Lele01g0738 520 SUPERFAMILY PP2C-like 200 511 IPR036457 -
Lele01g0738 520 ProSiteProfiles PPM-type phosphatase domain profile. 206 510 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0738 Lele-ChrLele01 4309162 4312477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0738 109 520 PP2C-type Phosphatase Gene Family AT1G17550 56.604 4.44e-165 476