Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0726 ATGGACGATCCTCGGAGTCAGAGCAGTCAGGGGCGGAAGAAGGAACCTTGCAGAGAAGCCTGGACACCTGAGGAAGACATGAAATTGGTTCAAGTCATTGAATTACATGGCCCTAAGAAGTGGAAGTTTCTCGCAGCCAATGCAGGTCTAAATCGATGTGGCAAGAGTTGCAGACTGAGATGGTTAAATTACCTTAGACCCAATATCAAGAGAGGCAATATATCAGATCAAGAGGTAGACTTAATACTCAGGCTTCACAAACTCCTAGGTAACAGGTGGTCTTTGATAGCTGGAAGACTTCCAGGTCGAACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATAAGTCCCAGGAAACAAAACCCGGGTTTCAAAAAAGATTCCACGGTGGAGATAACCACAGCACCCAAGAAAGCTGCAGTAATTAGTACTAATGAAGAACAGGTCGGGCATAGGGTGGCGGAGAACTCGAAGCCTGGCTTTGTTGAAGACCATGAACTTTTCATTCCTTGTAGCAGCGAAGGACCGCTAAGTTTGGAATGGGTGAGCAAGTTTCTTGAAATGGAAGAAACTTGGTTTGGATTTGCAGATTCGTGA 612 0.4461 MDDPRSQSSQGRKKEPCREAWTPEEDMKLVQVIELHGPKKWKFLAANAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEVDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKISPRKQNPGFKKDSTVEITTAPKKAAVISTNEEQVGHRVAENSKPGFVEDHELFIPCSSEGPLSLEWVSKFLEMEETWFGFADS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0726 203 SMART sant 17 67 IPR001005 -
Lele01g0726 203 SMART sant 70 118 IPR001005 -
Lele01g0726 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 65 IPR017930 -
Lele01g0726 203 MobiDBLite consensus disorder prediction 1 20 - -
Lele01g0726 203 CDD SANT 75 116 IPR001005 -
Lele01g0726 203 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele01g0726 203 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Lele01g0726 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele01g0726 203 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele01g0726 203 FunFam MYB-related transcription factor 17 70 - -
Lele01g0726 203 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Lele01g0726 203 CDD SANT 20 65 IPR001005 -
Lele01g0726 203 Gene3D - 10 70 - -
Lele01g0726 203 SUPERFAMILY Homeodomain-like 18 112 IPR009057 -
Lele01g0726 203 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 153 - -
Lele01g0726 203 Gene3D - 74 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0726 Lele-ChrLele01 4273166 4274041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0726 7 149 MYB Transcription Factor Family AT5G40330 53.147 1.88e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele01g0726 Myb_DNA-binding 1.8e-16 CL0123