Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0700 ATGGTTTGTGAGATGGAGAATGACTATATCGATGACATGGACATAGAAGTCCTGCATTCGATGTGGCCTGAAGATATTGGAACTGATGTTGGTAAAAAATTTAACATGGAAAAACCTGGAAAGGACCAAGATATGTTGGAAGAGATTATAATGATGGGGGAGTCAACTGTAGTTGATTTCACTCATCTAATGGAGCTCACAAATTATACAGATAAGGGATCTTCTCAGCTCTCCCACCTTATGAAACACTTGGAGTATAAGCATGCCAATGCCGTGCGTCTTCTAAGAGAAGAACTTGACAACCTAAGCAAACAGAGGCGCGAGGTTGAGCTGAGGAAGTTGGAGATATTGGAGGAGCATCGGTTTGAAGAAGAAACAACATATGGGGACAAACGTTCAGTTTCTATTTTGGATGAAATATATGATTTATGGCAAGATGTACCACGCAGGAAATGCAATGTTGTTGTTGAAAACAATAGAATTGAAATAGATGCCGAGTATGATACCACTGTATATTGGAAACAGCGGGCGCTGCATTTGGAAAAGATGTTGGAGGCAAGTGTTCAAAGAGAGCAGATACTTGCAGAGAAGTTGCAAGAAAGTATAAAGAATCTTGAAAAGCAGTCCTCACCTGTAGAAGAACTGTCCCAGATTCTGAAGAGGGCTGATAATTTCTTGCATTTTGTACTCCAGAATGCACCTGTGGTTATGGGTCATCAGGACAAAGAGTTGCGATATCGATTTATCTATAATCATTTTCCAAGTTTGCACGAGGAGGACATCATTGGAAAAACAGATGTTGAAATTTTTACAGGATCTGGTGTTAAAGAATCTCAAGATTTTAAGAGAGAAGTTCTAGAAAAAGGCTTGCCTGCGAAAAGGGAAATTACTTTTGAGACAGAATTATTTGGGTCAAAGACATTCCTGATTTATGTAGAACCTGTCTTCAGCAAGACAGGGGAGACGCTAGGAATAAACTATATGGGAATGGATGTCACAGATCAGGTGAGAAAAAGAGAAAGGATGATGAAAATCCGGGAAGAAATCGCGGTTCAGAAAGCCAAGGAAACAGAACTTAATAAAACCATCCACATTACAGAGGAGACTATGAGAGCAAAACAAATGTTGGCAACCATGTCTCATGAGATAAGATCCCCATTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTAGGACAAAACTCGATCGCGAGCAAAGACAACTCTTGGGTGTCATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATCCTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTAGAAGCAACCAAGTTCCGACCAAGGGAGGTAGTAAAGCATGTACTCCAGACTGCTGCAGCCTCACTGCAGAAAAAATTAACCTTAGAAGGACATGTAGCAGATGATGTACCAACTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATTTAGTCAGCAACGCTATCAAGTTTACTCATAAAGGCAAGGTTGGTATAAATCTTTACGTTGTACCAGAGCCAGCTTTTGCTAAAGCAGAAGTAAGCCTCCTGAAGATTAGTGCAGACCACTCTAGTATTTCAGGGAATGGAGTAGAAGAGAAGTATCATTCAACATCTCAAAATAGGAGCAACCAAAATCATGCATCGAGTGATGAAGATAGATCTCCAGTTAAAAGCGAATGCTTAATGAGTGGAGGTACTGAGGAGCAACCTCATTCAACTGAAACAACAGTGTGGATACGTTGTGATGTCTATGACACAGGAATTGGAATACCAGAGAAGGCTATACCTACGTTATTTAAAAGGTACATGCAAGTTAGTGCAGACCATGCAAGAAAGTATGGTGGGACAGGGCTGGGACTAGCAATATGCAAACAACTGGTCGAGTTAATGGGTGGTCGTCTTACTTTGAATAGCAAAGAACACAGTGGTTCTACTTTTACCTTCATATTGCCATACAAGGTTTCAACTCTTTGTGATCATTCTGATGAGTCCTCAGATACAGAGGATGATGATGATGATGCATCTGATAATACCACGGAGGGCTTCTTCAAATTTCAAGCACCCAATTTGGGCTCTCTGTTCTCCTCCCATGGATGTAGCAGGATCCAAAAGTTATTACCTCAAAAAATTGGGAGTTCACCCTCGCATAAATTCAATGGGTTTTCAGAGAATTCCTACTCAATTTCCCATAATAATGACAGATCGAAAGAAATAACTTCAGTTGAGGATGCATCCTGGATAACTGATGGCCCGGATATATCTGAATGTGCATGTTCATCAAGTCACAGCCCAGAGATGGTGAATGAAAATGTAGATTCAAGAAGCAAATTACGAAATGGCATTGCAGATTCTTCATACCACACGGAGGTAGATCAAGATCGGGAAGCAATAGCAACAACGTCAAGAGAACAAGCACGTCAGAGTCAAGAAAGAGCAGAGATTTCCTCGCAATGCGTCACTAGCATCAGTACTTCAGAAGTAGCAAAACCAAATTCAAAGCCCAAGATCCTTCTCGTTGAGGATAACAAGATCAATGTCATGGTGACGCAGTCAATGATGAAGCAATTAGGTCATAGCATAGAAGTTGTGAATAATGGAGTGGAAGCTGTACGTGCCGTTCAGCGCCAGAGTTATGACCTAATTCTTATGGATGTGTGCATGCCAGTTATGAATGGTCTGCAAGCAACAAAACTGATTCGTTCTTTTGAAGAAACGGGTAACTGGGATGTTGCAAGAGAAGCTGGAATTGAGATAAATCTACCAGCTTCATGTTTGCATAATGGTGAATTTTGTTTACTTGCCACCGAGTCGAACCACATCCCCATTATTGCTATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTGTTGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAAATTGTCTTGAACAGTACTTACAGTGA 2988 0.407 MVCEMENDYIDDMDIEVLHSMWPEDIGTDVGKKFNMEKPGKDQDMLEEIIMMGESTVVDFTHLMELTNYTDKGSSQLSHLMKHLEYKHANAVRLLREELDNLSKQRREVELRKLEILEEHRFEEETTYGDKRSVSILDEIYDLWQDVPRRKCNVVVENNRIEIDAEYDTTVYWKQRALHLEKMLEASVQREQILAEKLQESIKNLEKQSSPVEELSQILKRADNFLHFVLQNAPVVMGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVRKRERMMKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSRTKLDREQRQLLGVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKKLTLEGHVADDVPTEVIGDVLRIRQILTNLVSNAIKFTHKGKVGINLYVVPEPAFAKAEVSLLKISADHSSISGNGVEEKYHSTSQNRSNQNHASSDEDRSPVKSECLMSGGTEEQPHSTETTVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTLNSKEHSGSTFTFILPYKVSTLCDHSDESSDTEDDDDDASDNTTEGFFKFQAPNLGSLFSSHGCSRIQKLLPQKIGSSPSHKFNGFSENSYSISHNNDRSKEITSVEDASWITDGPDISECACSSSHSPEMVNENVDSRSKLRNGIADSSYHTEVDQDREAIATTSREQARQSQERAEISSQCVTSISTSEVAKPNSKPKILLVEDNKINVMVTQSMMKQLGHSIEVVNNGVEAVRAVQRQSYDLILMDVCMPVMNGLQATKLIRSFEETGNWDVAREAGIEINLPASCLHNGEFCLLATESNHIPIIAMTANALSESAEECVANGMDSFVSKPVTFQKLKNCLEQYLQ 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0700 995 SUPERFAMILY CheY-like 843 995 IPR011006 -
Lele01g0700 995 CDD HisKA 373 432 IPR003661 GO:0000155|GO:0007165
Lele01g0700 995 MobiDBLite consensus disorder prediction 538 584 - -
Lele01g0700 995 FunFam Histidine kinase 5 839 995 - -
Lele01g0700 995 SMART HKATPase_4 482 665 IPR003594 -
Lele01g0700 995 CDD HATPase_EvgS-ArcB-TorS-like 487 662 - -
Lele01g0700 995 MobiDBLite consensus disorder prediction 671 691 - -
Lele01g0700 995 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 664 IPR036890 -
Lele01g0700 995 Coils Coil 188 215 - -
Lele01g0700 995 MobiDBLite consensus disorder prediction 812 837 - -
Lele01g0700 995 SMART REC_2 845 990 IPR001789 GO:0000160
Lele01g0700 995 Gene3D PAS domain 212 347 - -
Lele01g0700 995 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 663 IPR003594 -
Lele01g0700 995 CDD REC_hyHK_CKI1_RcsC-like 847 990 - -
Lele01g0700 995 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 7 994 - -
Lele01g0700 995 Coils Coil 92 119 - -
Lele01g0700 995 PRINTS Bacterial sensor protein C-terminal signature 590 604 IPR004358 GO:0016310|GO:0016772
Lele01g0700 995 PRINTS Bacterial sensor protein C-terminal signature 625 643 IPR004358 GO:0016310|GO:0016772
Lele01g0700 995 PRINTS Bacterial sensor protein C-terminal signature 649 662 IPR004358 GO:0016310|GO:0016772
Lele01g0700 995 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Lele01g0700 995 ProSiteProfiles Histidine kinase domain profile. 378 665 IPR005467 -
Lele01g0700 995 MobiDBLite consensus disorder prediction 538 556 - -
Lele01g0700 995 FunFam Histidine kinase 5 213 348 - -
Lele01g0700 995 FunFam Putative histidine kinase 5 359 436 - -
Lele01g0700 995 ProSiteProfiles Response regulatory domain profile. 846 994 IPR001789 GO:0000160
Lele01g0700 995 Gene3D - 359 436 - -
Lele01g0700 995 Pfam Response regulator receiver domain 847 914 IPR001789 GO:0000160
Lele01g0700 995 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Lele01g0700 995 MobiDBLite consensus disorder prediction 809 837 - -
Lele01g0700 995 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Lele01g0700 995 Gene3D - 437 668 IPR036890 -
Lele01g0700 995 Gene3D - 838 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0700 Lele-ChrLele01 4120171 4124622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0700 1 994 Histidine Kinase Gene Family AT5G10720 58.367 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele01g0700 HATPase_c 1.2e-27 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0700 01 4120171 4124622 Lele03g0698 03 4126595 4131236 hybridization
Lele01g0700 01 4120171 4124622 Lele04g0703 04 4259761 4264982 hybridization