Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0695 ATGAGCGCTCAAGTCACAACTTCGCAAGCAACTACCTCTCTCCCGCCGCGGGCACACGCATATCGCTTCTCGCGCCATATCAATGTCAGGCTGCCCGGGTTTCCTAGTAGTGTTGGCTCACTTGTTTGTGCTGCGCATTGTTTCAAACGGTTCATGTTCAGATTTCTTCCAAGCGTTACTTCTGCGAAATCTGCTCTAACTGAACTTCTGTCGAAGATTTTATCGTCGGTCAATGAGGAATGCCTTCGCCTTTGCGGCTATCTACCGTCACCGTGGCGCCTTGGTCTTCTCCAGAACTGTTGTGTAGCTATGTTTCTCCATCTAAACTGTTTGTTTGTACGGTTGTCTCACTATGAGAGTACATATCTTGCAGAGTTACGGCACGAGGGTGCAAATGAAGTCATCTTACGCAAATGCATGCCACTGGGATATCTTAAACACATTGAGGTTGCCAAGAGATCAGATTTTGGCTGGTTGCCAGCTTGCTTGCTGCATCAAAATTTGTATTCAACTGGCTTCACCAGTGTGCACGGGGACAAGCCATCTGCTGAGTATGCAAAGCTTAGGAGAGAATCCTTAGAAAGTGAATTTGGGCTTGCTCTTGGAACTTATGGCTCCAAAACTTTCTCCACTGTCTATCGGTTTGGCCCATTTTTGGCTTTGTACAGGGCAGCAATTATCTCATTTCATGTGTTCAGGCTAACATTTTGGCAGCTCTTTGTTCAAGACATAGAAAAGCGTGCAATTGAGTTTCGCAAAACTCTAATACGCTTGGGTCCCTTCTATGTTAAGCTTGGCCAGGCTTTGAGCACTAGGCCTGATATACTACCAACTGTATACTGCCAAGAACTTGCTAAGCTACAGGATCAAATACCCCCATTTTCAACTAAAGTTGCCATTAGATCTATAGAAACCCAGCTAGGTGCCCCTGTTTCTGAGATATTTAGTGACATTAGCCCAGAGCCTATTGCAGCAGCATCCTTAGGGCAAGTTTATAAAGCTCACTTGCATTCTGGAGAGCTGGTAGCTGTAAAAGTACAGAGGCCTGGTATGTCACTTTCACTGACCCTCGATGCCTTGTTGTTCCATATGATTGGTGGCCAACTAAAGCGATTTGCCAAGGCTCGTAGAGATCTTATTGTAGCAGTGAATGAGATAGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAAGGAAAAAATGCTGAGCGTTTTGCTTCTCTTTACAGCCTCCAAGCAAGTGGTAATGAACATGGTTACAGAGCTGGAGGAATAAACAAAAGTGGACTCAAAGGAATGAAATGCATCAAAGTTCCAAAAATATATTGGGACTATACACGTACCACTGTGCTGACTATGGAGTGGCTAGATGGAATTAAGCTTACTGATGAAACACGCCTGAAGAATGCTTCTTTGAACAAAAGAGAACTCATTGACCAGGGATTGTCCTGCTCTTTGATGCAACTGCTTGAGGTTGGATATTTCCATGCTGATCCACATCCAGGAAACCTGGTGGCAACCGATGATGGATCACTGGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAATGCTTGTGCACTTTGTTAATCGTGATTCTCTGGGTTTGGCAAATGACTTTCTTTCTTTGGGATTTATTCCGGAAGGAGTTGATGTATATGCAGTTTCTGATGCTTTAAAAGCATCCTTTGCTTATCGAACCGGTCAATCACGGGATTTCCAGGGAGTTATGAACCAACTCTATGATGTTATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTAGTGATAAGAGCATTGGGATCACTTGAGGGCACAGCAAAAATTCTGGATCCTGATTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTGATTGCAGACCCGAGTCCTGATATGAGAAGAATTTTGAGGCAACTTCTCATTTGTAACAATGGAGCTATTAGGTGGAATCGACTAGAGCGCTTGATAGCAGCAATATCTGAGCAGGCTTCTGATTCAACTGAAGACCCTAGTTCTGAGAAGTTTTCAAGTCCTTTGGGTTGGAAGTACTTTGACATGCATTCTGTTGTTGATGCCACTGAAGATCTTTTATTGTTCCTTCTATCAGACAAGGGTCTGAGAGTGCGCCTTTTCCTTCTCCGAGATATAATTGAAGCAGCTGATTTATTCCTGCAAGATGAAATCATCGATAATTTGTTGAAGGAGAGGCCTCTGGGCCAAAGCAGATTGCTATTCGAGGAGGAGCGTGCTGTTCTCAGTAGGATTGGAAAAGGCTTTAAGTACTTTAATGATGTGATTAAGTTGGCGCCAGAGGAGTGGACCGCCATGCTTCTACGGATGGCAATGAAACCTGATGTCCACAAATTTACTATAGACATTATTGCAGCTCTTGTTTATCATTTTAACCAGAGACTCCAAGATGCGTCTTGGCTTTATTTCTCAAAACTTATCCACAAATGGAAGTAG 2517 0.4338 MSAQVTTSQATTSLPPRAHAYRFSRHINVRLPGFPSSVGSLVCAAHCFKRFMFRFLPSVTSAKSALTELLSKILSSVNEECLRLCGYLPSPWRLGLLQNCCVAMFLHLNCLFVRLSHYESTYLAELRHEGANEVILRKCMPLGYLKHIEVAKRSDFGWLPACLLHQNLYSTGFTSVHGDKPSAEYAKLRRESLESEFGLALGTYGSKTFSTVYRFGPFLALYRAAIISFHVFRLTFWQLFVQDIEKRAIEFRKTLIRLGPFYVKLGQALSTRPDILPTVYCQELAKLQDQIPPFSTKVAIRSIETQLGAPVSEIFSDISPEPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARRDLIVAVNEIVRHMFDEIDYVLEGKNAERFASLYSLQASGNEHGYRAGGINKSGLKGMKCIKVPKIYWDYTRTTVLTMEWLDGIKLTDETRLKNASLNKRELIDQGLSCSLMQLLEVGYFHADPHPGNLVATDDGSLAYFDFGMMGDIPRHYRIGLIQMLVHFVNRDSLGLANDFLSLGFIPEGVDVYAVSDALKASFAYRTGQSRDFQGVMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKILDPDFKVIESAYPFVIGRLIADPSPDMRRILRQLLICNNGAIRWNRLERLIAAISEQASDSTEDPSSEKFSSPLGWKYFDMHSVVDATEDLLLFLLSDKGLRVRLFLLRDIIEAADLFLQDEIIDNLLKERPLGQSRLLFEEERAVLSRIGKGFKYFNDVIKLAPEEWTAMLLRMAMKPDVHKFTIDIIAALVYHFNQRLQDASWLYFSKLIHKWK 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0695 838 Pfam ABC1 atypical kinase-like domain 286 548 IPR004147 -
Lele01g0695 838 SUPERFAMILY Protein kinase-like (PK-like) 288 552 IPR011009 -
Lele01g0695 838 CDD ABC1_ADCK3-like 286 551 - -
Lele01g0695 838 ProSiteProfiles Protein kinase domain profile. 317 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0695 838 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 192 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0695 Lele-ChrLele01 4080896 4088243 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0695 01 4080896 4088243 Lele25g0692 25 4368783 4369414 CCT
Lele01g0695 01 4080896 4088243 Lele26g0697 26 4444957 4445588 CCT
Lele01g0695 01 4080896 4088243 Lele27g1400 27 20313998 20314628 CCT
Lele01g0695 01 4080896 4088243 Lele28g0680 28 4357723 4359576 CCT
Lele01g0695 01 4080896 4088243 Lele01g0695 01 4080896 4088243 ECH
Lele01g0695 01 4080896 4088243 Lele03g0692 03 4089708 4098711 hybridization
Lele01g0695 01 4080896 4088243 Lele04g0697 04 4229096 4239390 hybridization